| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1694* | 2020 |
| Analyses of non-coding somatic drivers in 2,658 cancer whole genomes E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ... Nature 578 (7793), 102-111, 2020 | 550* | 2020 |
| Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing I Cortés-Ciriano, JJK Lee, R Xi, D Jain, YL Jung, L Yang, D Gordenin, ... Nature genetics 52 (3), 331-341, 2020 | 542 | 2020 |
| Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis J Carlevaro-Fita, A Lanzós, L Feuerbach, C Hong, D Mas-Ponte, ... Communications biology 3 (1), 56, 2020 | 159 | 2020 |
| Integrative pathway enrichment analysis of multivariate omics data M Paczkowska, J Barenboim, N Sintupisut, NS Fox, H Zhu, D Abd-Rabbo, ... Nature communications 11 (1), 735, 2020 | 136 | 2020 |
| Pathway and network analysis of more than 2500 whole cancer genomes MA Reyna, D Haan, M Paczkowska, LPC Verbeke, M Vazquez, ... Nature communications 11 (1), 729, 2020 | 93 | 2020 |
| Sex differences in oncogenic mutational processes CH Li, SD Prokopec, RX Sun, F Yousif, N Schmitz, PC Boutros Nature communications 11 (1), 4330, 2020 | 65 | 2020 |
| A Significant Regulatory Mutation Burden at a High‐Affinity Position of the CTCF Motif in Gastrointestinal Cancers HM Umer, M Cavalli, MJ Dabrowski, K Diamanti, M Kruczyk, G Pan, ... Human mutation 37 (9), 904-913, 2016 | 43 | 2016 |
| Intra-and inter-individual metabolic profiling highlights carnitine and lysophosphatidylcholine pathways as key molecular defects in type 2 diabetes K Diamanti, M Cavalli, G Pan, MJ Pereira, C Kumar, S Skrtic, M Grabherr, ... Scientific reports 9 (1), 1-13, 2019 | 40 | 2019 |
| Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples MH Bailey, WU Meyerson, LJ Dursi, LB Wang, G Dong, WW Liang, ... Nature Communications 11 (1), 1-27, 2020 | 38 | 2020 |
| Combined burden and functional impact tests for cancer driver discovery using DriverPower S Shuai, S Gallinger, LD Stein Nature communications 11 (1), 734, 2020 | 37 | 2020 |
| A Multi-Omics Approach to Liver Diseases: Integration of Single Nuclei Transcriptomics with Proteomics and HiCap Bulk Data in Human Liver M Cavalli, K Diamanti, G Pan, R Spalinskas, C Kumar, AS Deshmukh, ... OMICS: A Journal of Integrative Biology 24 (4), 180-194, 2020 | 28 | 2020 |
| R. ROSETTA: an interpretable machine learning framework M Garbulowski, K Diamanti, K Smolińska, N Baltzer, P Stoll, S Bornelöv, ... BMC Bioinformatics 22 (1), 1-18, 2021 | 25 | 2021 |
| Mapping chromatin accessibility and active regulatory elements reveals pathological mechanisms in human gliomas K Stępniak, MA Machnicka, J Mieczkowski, A Macioszek, B Wojtaś, ... Nature Communications 12 (1), 1-17, 2021 | 25 | 2021 |
| Discovering networks of interdependent features in high-dimensional problems M Dramiński, MJ Da̧browski, K Diamanti, J Koronacki, J Komorowski Big Data Analysis: New Algorithms for a New Society, 285-304, 2015 | 17 | 2015 |
| Unveiling new interdependencies between significant DNA methylation sites, gene expression profiles and glioma patients survival MJ Dabrowski, M Draminski, K Diamanti, K Stepniak, MA Mozolewska, ... Scientific Reports 8 (1), 4390, 2018 | 16 | 2018 |
| Organ-specific metabolic pathways distinguish prediabetes, type 2 diabetes, and normal tissues K Diamanti, M Cavalli, MJ Pereira, G Pan, C Castillejo-Lopez, C Kumar, ... Cell Reports Medicine, 100763, 2022 | 15 | 2022 |
| Multifaceted regulation of hepatic lipid metabolism by YY1 G Pan, K Diamanti, M Cavalli, AL Gutiérrez, J Komorowski, C Wadelius Life Science Alliance 4 (7), 2021 | 13 | 2021 |
| Interpretable machine learning identifies paediatric Systemic Lupus Erythematosus subtypes based on gene expression data SA Yones, A Annett, P Stoll, K Diamanti, L Holmfeldt, CF Barrenäs, ... Scientific Reports 12 (1), 7433, 2022 | 12 | 2022 |
| The Thioesterase ACOT1 as a Regulator of Lipid Metabolism in Type 2 Diabetes Detected in a Multi-Omics Study of Human Liver M Cavalli, K Diamanti, Y Dang, P Xing, G Pan, X Chen, C Wadelius OMICS: A Journal of Integrative Biology 25 (10), 652-659, 2021 | 12 | 2021 |
Jan KomorowskiUppsala University, Sweden & IPI, Polish Academy of Sciences, PolandZweryfikowany adres z icm.uu.se
