Engineering enzyme stability and resistance to an organic cosolvent by modification of residues in the access tunnel T Koudelakova, R Chaloupkova, J Brezovsky, Z Prokop, E Sebestova, ... Angewandte Chemie 125 (7), 2013-2017, 2013 | 169 | 2013 |
High dietary sugar reshapes sweet taste to promote feeding behavior in Drosophila melanogaster CE May, A Vaziri, YQ Lin, O Grushko, M Khabiri, QP Wang, KJ Holme, ... Cell reports 27 (6), 1675-1685. e7, 2019 | 112 | 2019 |
Rapid metabolic shifts occur during the transition between hunger and satiety in Drosophila melanogaster D Wilinski, J Winzeler, W Duren, JL Persons, KJ Holme, J Mosquera, ... Nature communications 10 (1), 4052, 2019 | 55 | 2019 |
Interaction of organic solvents with protein structures at protein-solvent interface M Khabiri, B Minofar, J Brezovský, J Damborský, R Ettrich Journal of molecular modeling 19, 4701-4711, 2013 | 48 | 2013 |
Persistent epigenetic reprogramming of sweet taste by diet A Vaziri, M Khabiri, BT Genaw, CE May, PL Freddolino, M Dus Science advances 6 (46), eabc8492, 2020 | 43 | 2020 |
Aggregation of oligoarginines at phospholipid membranes: molecular dynamics simulations, time-dependent fluorescence shift, and biomimetic colorimetric assays M Vazdar, E Wernersson, M Khabiri, L Cwiklik, P Jurkiewicz, M Hof, ... The journal of physical chemistry B 117 (39), 11530-11540, 2013 | 43 | 2013 |
Expansion of Access Tunnels and Active‐Site Cavities Influence Activity of Haloalkane Dehalogenases in Organic Cosolvents V Stepankova, M Khabiri, J Brezovsky, A Pavelka, J Sykora, M Amaro, ... ChemBioChem 14 (7), 890-897, 2013 | 40 | 2013 |
Properties of oxidized phospholipid monolayers: an atomistic molecular dynamics study M Khabiri, M Roeselova, L Cwiklik Chemical Physics Letters 519, 93-99, 2012 | 40 | 2012 |
Charybdotoxin Unbinding from the mKv1.3 Potassium Channel: A Combined Computational and Experimental Study M Khabiri, A Nikouee, L Cwiklik, S Grissmer, R Ettrich The Journal of Physical Chemistry B 115 (39), 11490-11500, 2011 | 34 | 2011 |
Comment on “Deficiencies in Molecular Dynamics Simulation-Based Prediction of Protein-DNA Binding Free Energy Landscapes” V Gapsys, M Khabiri, BL de Groot, PL Freddolino The Journal of Physical Chemistry B 124 (6), 1115-1123, 2018 | 28 | 2018 |
The opposing effect of butanol and butyric acid on the abundance of bromide and iodide at the aqueous solution–air interface MT Lee, F Orlando, M Khabiri, M Roeselová, MA Brown, M Ammann Physical Chemistry Chemical Physics 21 (16), 8418-8427, 2019 | 14 | 2019 |
Charybdotoxin and Margatoxin Acting on the Human Voltage-Gated Potassium Channel hKv1.3 and Its H399N Mutant: An Experimental and Computational … A Nikouee, M Khabiri, S Grissmer, R Ettrich The Journal of Physical Chemistry B 116 (17), 5132-5140, 2012 | 14 | 2012 |
Interdomain communication in the endonuclease/motor subunit of type I restriction-modification enzyme EcoR124I D Sinha, K Shamayeva, V Ramasubramani, D Řeha, V Bialevich, ... Journal of molecular modeling 20, 1-13, 2014 | 8 | 2014 |
Computational Investigations of Biomolecular Systems and Comparison with Experiments in Various Environmental Conditions M Khabiri Nove Hrady, Czech Republic, 2011 | 5 | 2011 |
Scorpion toxins prefer salt solutions A Nikouee, M Khabiri, L Cwiklik Journal of molecular modeling 21, 1-14, 2015 | 3 | 2015 |
Genome-wide Prediction of Potential Polycomb Response Elements and their Functions M Khabiri, P Freddolino bioRxiv 516500; doi: https://doi.org/10.1101/516500, 2019 | 2 | 2019 |
The polycomb repressive complex 2.1 links the food environment to a persistent neural state A Vaziri, M Khabiri, BT Genaw, CE May, PL Freddolino, M Dus bioRxiv, 2020.03. 25.007773, 2020 | 1 | 2020 |
In silico characterization of the motor subunit of the e. coli. restriction-modification system EcoR1241 D Sinha, M Khabiri, D Reha, R Ettrich Journal of Cheminformatics 5, 1-1, 2013 | 1 | 2013 |
Expansion of access tunnels and active-site cavities influence activity of haloalkane dehalogenases in organic cosolvents V Štěpánková, M Khabiri, J Brezovský, A Pavelka, J Sykora, M Amaro, ... HALOALKANE DEHALOGENASES IN NON-CONVENTIONAL REACTION MEDIA 14 (7), 79, 2013 | 1 | 2013 |
Organic solvent effects on protein tertiary structure and enzyme stability: A computational study M Khabiri, B Minofar, V Štěpánková, R Chaloupková, J Brezovský, ... | 1 | 2010 |