Kliment Olechnovic

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Česlovas VenclovasInstitute of Biotechnology, Life Sciences Center, Vilnius UniversityZweryfikowany adres z bti.vu.lt
Justas DapkūnasInstitute of Biotechnology, Life Sciences Center, Vilnius UniversityZweryfikowany adres z bti.vu.lt
Andriy KryshtafovychUniversity of California, DavisZweryfikowany adres z ucdavis.edu
Albertas TiminskasVilnius University, Institute of BiotechnologyZweryfikowany adres z bti.vu.lt
Björn WallnerProfessorZweryfikowany adres z liu.se
Torsten SchwedeUniversity of Basel, Biozentrum & SIB Swiss Institute of BioinformaticsZweryfikowany adres z unibas.ch
David Menéndez HurtadoSavantic AB. Former: Department of Biochemistry and Biophysics, Stockholm UniversityZweryfikowany adres z scilifelab.se
Liam McGuffinProfessor of Bioinformatics, University of ReadingZweryfikowany adres z reading.ac.uk
Jianlin ChengCurators' Distinguished Professor and Thompson Distinguished Professor, University of MissouriZweryfikowany adres z missouri.edu
Arne ElofssonScience for Life Laboratory and department of Biochemistry and Biophysics, Stockholm UniversityZweryfikowany adres z bioinfo.se
Sergei GrudininLJK CNRS, Grenoble, FranceZweryfikowany adres z inria.fr
Maria KadukovaPhD student, Moscow Institute of Physics and Technology; Grenoble Alps UniversityZweryfikowany adres z phystech.edu
Chaok SeokSeoul National UniversityZweryfikowany adres z snu.ac.kr
Dennis Della CorteAssistant Professor of Physics, Brigham Young UniversityZweryfikowany adres z byu.edu
John MoultUniversity of MarylandZweryfikowany adres z tunc.org
Jonghun WonGalux Inc.Zweryfikowany adres z galux.co.kr
Wendy BillingsPhD Candidate, University of California BerkeleyZweryfikowany adres z berkeley.edu
Visvaldas KairysVilnius UniversityZweryfikowany adres z bti.vu.lt
Vytautas RaškevičiusResearcher, Lithuanian University of Health SciencesZweryfikowany adres z lsmu.lt

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Kliment Olechnovic

CNRS Laboratoire Jean Kuntzmann (on sabbatical leave from Vilnius University Life Sciences Center)

Zweryfikowany adres z ibt.lt - Strona główna

bioinformatics protein structure machine learning Voronoi diagram


Tytuł Sortuj wg cytatów Sortuj wg roku Sortuj wg tytułu	Cytowane przez Cytowane przez	Rok
VoroMQA: Assessment of protein structure quality using interatomic contact areas K Olechnovič, Č Venclovas Proteins: Structure, Function, and Bioinformatics 85 (6), 1131-1145, 2017	160	2017
CAD‐score: a new contact area difference‐based function for evaluation of protein structural models K Olechnovič, E Kulberkytė, Č Venclovas Proteins: Structure, Function, and Bioinformatics 81 (1), 149-162, 2013	139	2013
Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019	117	2019
Estimation of model accuracy in CASP13 J Cheng, MH Choe, A Elofsson, KS Han, J Hou, AHA Maghrabi, ... Proteins: Structure, Function, and Bioinformatics 87 (12), 1361-1377, 2019	91	2019
Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment MF Lensink, G Brysbaert, T Mauri, N Nadzirin, S Velankar, RAG Chaleil, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1800-1823, 2021	81	2021
Voronota: a fast and reliable tool for computing the vertices of the Voronoi diagram of atomic balls K Olechnovič, Č Venclovas Journal of computational chemistry 35 (8), 672-681, 2014	76	2014
The PPI3D web server for searching, analyzing and modeling protein–protein interactions in the context of 3D structures J Dapkūnas, A Timinskas, K Olechnovič, M Margelevičius, R Dičiūnas, ... Bioinformatics 33 (6), 935-937, 2017	55	2017
Comparative analysis of methods for evaluation of protein models against native structures K Olechnovič, B Monastyrskyy, A Kryshtafovych, Č Venclovas Bioinformatics 35 (6), 937-944, 2019	38	2019
VoroCNN: deep convolutional neural network built on 3D Voronoi tessellation of protein structures I Igashov, K Olechnovič, M Kadukova, Č Venclovas, S Grudinin Bioinformatics 37 (16), 2332-2339, 2021	33	2021
VoroMQA web server for assessing three-dimensional structures of proteins and protein complexes K Olechnovič, Č Venclovas Nucleic acids research 47 (W1), W437-W442, 2019	32	2019
Voroprot: an interactive tool for the analysis and visualization of complex geometric features of protein structure K Olechnovič, M Margelevičius, Č Venclovas Bioinformatics 27 (5), 723-724, 2011	29	2011
Modeling SARS‐CoV‐2 proteins in the CASP‐commons experiment A Kryshtafovych, J Moult, WM Billings, D Della Corte, K Fidelis, S Kwon, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1987-1996, 2021	19	2021
The CAD-score web server: contact area-based comparison of structures and interfaces of proteins, nucleic acids and their complexes K Olechnovič, Č Venclovas Nucleic acids research 42 (W1), W259-W263, 2014	17	2014
Impact of AlphaFold on structure prediction of protein complexes: the CASP15‐CAPRI experiment MF Lensink, G Brysbaert, N Raouraoua, PA Bates, M Giulini, RV Honorato, ... Proteins: Structure, Function, and Bioinformatics 91 (12), 1658-1683, 2023	15	2023
Modeling of protein complexes in CASP14 with emphasis on the interaction interface prediction J Dapkūnas, K Olechnovič, Č Venclovas Proteins: Structure, Function, and Bioinformatics 89 (12), 1834-1843, 2021	15	2021
Structural modeling of protein complexes: Current capabilities and challenges J Dapkūnas, K Olechnovič, Č Venclovas Proteins: Structure, Function, and Bioinformatics 87 (12), 1222-1232, 2019	13	2019
Modeling of protein complexes in CAPRI round 37 using template‐based approach combined with model selection J Dapkūnas, K Olechnovič, Č Venclovas Proteins: Structure, Function, and Bioinformatics 86, 292-301, 2018	11	2018
Prediction of protein assemblies by structure sampling followed by interface‐focused scoring K Olechnovič, L Valančauskas, J Dapkūnas, Č Venclovas Proteins: Structure, Function, and Bioinformatics 91 (12), 1724-1733, 2023	10	2023
The use of interatomic contact areas to quantify discrepancies between RNA 3D models and reference structures K Olechnovič, Č Venclovas Nucleic acids research 42 (9), 5407-5415, 2014	10	2014
VoroContacts: a tool for the analysis of interatomic contacts in macromolecular structures K Olechnovič, Č Venclovas Bioinformatics 37 (24), 4873-4875, 2021	9	2021

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