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Roman Jaksik
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Autophagy, apoptosis, mitoptosis and necrosis: interdependence between those pathways and effects on cancer
W Chaabane, SD User, M El-Gazzah, R Jaksik, E Sajjadi, ...
Archivum immunologiae et therapiae experimentalis 61, 43-58, 2013
3822013
Chronic infection drives Dnmt3a-loss-of-function clonal hematopoiesis via IFNγ signaling
D Hormaechea-Agulla, KA Matatall, DT Le, B Kain, X Long, P Kus, ...
Cell stem cell 28 (8), 1428-1442. e6, 2021
1802021
Microarray experiments and factors which affect their reliability
R Jaksik, M Iwanaszko, J Rzeszowska-Wolny, M Kimmel
Biology direct 10, 1-14, 2015
1562015
Gene signature of the post-Chernobyl papillary thyroid cancer
D Handkiewicz-Junak, M Swierniak, D Rusinek, M Oczko-Wojciechowska, ...
European journal of nuclear medicine and molecular imaging 43, 1267-1277, 2016
792016
Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition
M Marczyk, R Jaksik, A Polanski, J Polanska
BMC bioinformatics 14, 1-12, 2013
562013
Bystander effects induced by medium from irradiated cells: similar transcriptome responses in irradiated and bystander K562 cells
R Herok, M Konopacka, J Polanska, A Swierniak, J Rogolinski, R Jaksik, ...
International Journal of Radiation Oncology* Biology* Physics 77 (1), 244-252, 2010
492010
Identification of endogenous control miRNAs for RT-qPCR in T-cell acute lymphoblastic leukemia
M Drobna, B Szarzyńska-Zawadzka, P Daca-Roszak, M Kosmalska, ...
International journal of molecular sciences 19 (10), 2858, 2018
342018
Interferon gamma mediates hematopoietic stem cell activation and niche relocalization through BST2
MA Florez, KA Matatall, Y Jeong, L Ortinau, PW Shafer, AM Lynch, ...
Cell reports 33 (12), 2020
292020
Replication stress leading to apoptosis within the S-phase contributes to synergism between vorinostat and AZD1775 in HNSCC harboring high-risk TP53 mutation
N Tanaka, AA Patel, L Tang, NL Silver, A Lindemann, H Takahashi, ...
Clinical Cancer Research 23 (21), 6541-6554, 2017
282017
MicroRNAs and reactive oxygen species: are they in the same regulatory circuit?
R Jaksik, A Lalik, M Skonieczna, A Cieslar-Pobuda, S Student, ...
Mutation Research/Genetic Toxicology and Environmental Mutagenesis 764, 64-71, 2014
272014
PTEN abnormalities predict poor outcome in children with T‐cell acute lymphoblastic leukemia treated according to ALL IC‐BFM protocols
B Szarzyńska‐Zawadzka, JB Kunz, Ł Sędek, M Kosmalska, K Zdon, ...
American journal of hematology 94 (4), E93-E96, 2019
262019
Comprehensive investigation of miRNome identifies novel candidate miRNA-mRNA interactions implicated in T-cell acute lymphoblastic leukemia
M Dawidowska, R Jaksik, M Drobna, B Szarzyńska-Zawadzka, ...
Neoplasia 21 (3), 294-310, 2019
262019
hsa-miR-20b-5p and hsa-miR-363-3p Affect Expression of PTEN and BIM Tumor Suppressor Genes and Modulate Survival of T-ALL Cells In Vitro
M Drobna, B Szarzyńska, R Jaksik, Ł Sędek, A Kuchmiy, T Taghon, ...
Cells 9 (5), 1137, 2020
252020
Calculation of reliable transcript levels of annotated genes on the basis of multiple probe-sets in Affymetrix microarrays.
R Jaksik, J Polańska, R Herok, J Rzeszowska-Wolny
Acta biochimica Polonica 56 (2), 2009
252009
Statistical inference for the evolutionary history of cancer genomes
KN Dinh, R Jaksik, M Kimmel, A Lambert, S Tavaré
222020
Proteome profiles of different types of thyroid cancers
M Gawin, A Wojakowska, M Pietrowska, Ł Marczak, M Chekan, K Jelonek, ...
Molecular and cellular endocrinology 472, 68-79, 2018
202018
Cross talk between cytokine and hyperthermia-induced pathways: identification of different subsets of NF-κB-dependent genes regulated by TNFα and heat shock
P Janus, T Stokowy, R Jaksik, K Szoltysek, L Handschuh, J Podkowinski, ...
Molecular Genetics and Genomics 290, 1979-1990, 2015
192015
Regulation of p53 by siRNA in radiation treated cells: Simulation studies
K Puszyński, R Jaksik, A Świerniak
International Journal of Applied Mathematics and Computer Science 22 (4 …, 2012
172012
Sources of high variance between probe signals in affymetrix short oligonucleotide microarrays
R Jaksik, M Marczyk, J Polanska, J Rzeszowska-Wolny
Sensors 14 (1), 532-548, 2013
162013
Gamred—Adaptive filtering of high-throughput biological data
M Marczyk, R Jaksik, A Polanski, J Polanska
IEEE/ACM Transactions on Computational Biology and Bioinformatics 17 (1 …, 2018
152018
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