| Real-time, portable genome sequencing for Ebola surveillance J Quick, NJ Loman, S Duraffour, JT Simpson, E Severi, L Cowley, JA Bore, ... Nature 530 (7589), 228-232, 2016 | 1462 | 2016 |
| Whole-Genome Sequencing for National Surveillance of Shiga Toxin–Producing Escherichia coli O157 TJ Dallman, L Byrne, PM Ashton, LA Cowley, NT Perry, G Adak, ... Clinical Infectious Diseases 61 (3), 305-312, 2015 | 190 | 2015 |
| Unique human immune signature of Ebola virus disease in Guinea P Ruibal, L Oestereich, A Lüdtke, B Becker-Ziaja, DM Wozniak, R Kerber, ... Nature 533 (7601), 100-104, 2016 | 180 | 2016 |
| Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing K Břinda, A Callendrello, KC Ma, DR MacFadden, T Charalampous, ... Nature microbiology 5 (3), 455-464, 2020 | 86 | 2020 |
| ESBL-producing and macrolide-resistant Shigella sonnei infections among men who have sex with men, England, 2015 P Mook, J McCormick, M Bains, LA Cowley, MA Chattaway, C Jenkins, ... Emerging infectious diseases 22 (11), 1948, 2016 | 73 | 2016 |
| Laboratory findings, compassionate use of favipiravir, and outcome in patients with Ebola virus disease, Guinea, 2015—a retrospective observational study R Kerber, E Lorenz, S Duraffour, D Sissoko, M Rudolf, A Jaeger, SD Cisse, ... The Journal of infectious diseases 220 (2), 195-202, 2019 | 59 | 2019 |
| An investigation of the diversity of strains of enteroaggregative Escherichia coli isolated from cases associated with a large multi-pathogen foodborne outbreak in the UK TJ Dallman, MA Chattaway, LA Cowley, M Doumith, R Tewolde, ... PloS one 9 (5), e98103, 2014 | 59 | 2014 |
| Different features of Vδ2 T and NK cells in fatal and non-fatal human Ebola infections E Cimini, D Viola, M Cabeza-Cabrerizo, A Romanelli, N Tumino, A Sacchi, ... PLoS Neglected Tropical Diseases 11 (5), e0005645, 2017 | 49 | 2017 |
| Analysis of whole genome sequencing for the Escherichia coli O157:H7 typing phages LA Cowley, SJ Beckett, M Chase-Topping, N Perry, TJ Dallman, DL Gally, ... BMC genomics 16, 1-13, 2015 | 45 | 2015 |
| Evolution of a zoonotic pathogen: investigating prophage diversity in enterohaemorrhagic Escherichia coli O157 by long-read sequencing S Shaaban, LA Cowley, SP McAteer, C Jenkins, TJ Dallman, JL Bono, ... Microbial genomics 2 (12), e000096, 2016 | 42 | 2016 |
| Evolution via recombination: Cell-to-cell contact facilitates larger recombination events in Streptococcus pneumoniae LA Cowley, FC Petersen, R Junges, M Jimson D. Jimenez, DA Morrison, ... PLoS Genetics 14 (6), e1007410, 2018 | 38 | 2018 |
| Short-term evolution of Shiga toxin-producing Escherichia coli O157:H7 between two food-borne outbreaks LA Cowley, TJ Dallman, S Fitzgerald, N Irvine, PJ Rooney, SP McAteer, ... Microbial Genomics 2 (9), e000084, 2016 | 35 | 2016 |
| Lineage calling can identify antibiotic resistant clones within minutes K Břinda, A Callendrello, L Cowley, T Charalampous, RS Lee, ... bioRxiv 403204, 455-464, 2018 | 27 | 2018 |
| Transposon Insertion Sequencing Elucidates Novel Gene Involvement in Susceptibility and Resistance to Phages T4 and T7 in Escherichia coli O157 LA Cowley, AS Low, D Pickard, CJ Boinett, TJ Dallman, M Day, N Perry, ... MBio 9 (4), 10.1128/mbio. 00705-18, 2018 | 26 | 2018 |
| Final report of engage‐establishing next generation sequencing ability for genomic analysis in Europe RS Hendriksen, SK Pedersen, P Leekitcharoenphon, B Malorny, ... EFSA Supporting Publications 15 (6), 1431E, 2018 | 25 | 2018 |
| Within-host Mycobacterium tuberculosis diversity and its utility for inferences of transmission MA Martin, RS Lee, LA Cowley, JL Gardy, WP Hanage Microbial Genomics 4 (10), e000217, 2018 | 23 | 2018 |
| Temperate bacteriophages from chronic Pseudomonas aeruginosa lung infections show disease-specific changes in host range and modulate antimicrobial susceptibility MA Tariq, FLC Everest, LA Cowley, R Wright, GS Holt, H Ingram, ... MSystems 4 (4), 10.1128/msystems. 00191-18, 2019 | 20 | 2019 |
| A metagenomic approach to characterize temperate bacteriophage populations from Cystic Fibrosis and non-Cystic Fibrosis bronchiectasis patients MA Tariq, FLC Everest, LA Cowley, A De Soyza, GS Holt, SH Bridge, ... Frontiers in microbiology 6, 97, 2015 | 20 | 2015 |
| Genomics, social media and mobile phone data enable mapping of SARS-CoV-2 lineages to inform health policy in Bangladesh LA Cowley, MH Afrad, SIA Rahman, MMA Mamun, T Chin, A Mahmud, ... Nature microbiology 6 (10), 1271-1278, 2021 | 17 | 2021 |
| Acquisition and loss of CTX-M plasmids in Shigella species associated with MSM transmission in the UK RK Locke, DR Greig, C Jenkins, TJ Dallman, LA Cowley Microbial genomics 7 (8), 000644, 2021 | 17 | 2021 |
Tim DallmanUniversity of UtrechtZweryfikowany adres z uu.nl
