Guido Uguzzoni
Guido Uguzzoni
Italian Institute for Genomic Medicine (IIGM)
Zweryfikowany adres z polito.it
Cytowane przez
Cytowane przez
Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis
G Uguzzoni, S John Lovis, F Oteri, A Schug, H Szurmant, M Weigt
Proceedings of the National Academy of Sciences 114 (13), E2662-E2671, 2017
Deterministic domain wall motion orthogonal to current flow due to spin orbit torque
D Bhowmik, ME Nowakowski, L You, OJ Lee, D Keating, M Wong, J Bokor, ...
Scientific reports 5 (1), 11823, 2015
Efficient generative modeling of protein sequences using simple autoregressive models
J Trinquier, G Uguzzoni, A Pagnani, F Zamponi, M Weigt
Nature communications 12 (1), 5800, 2021
Maximum-entropy models of sequenced immune repertoires predict antigen-antibody affinity
L Asti, G Uguzzoni, P Marcatili, A Pagnani
PLoS computational biology 12 (4), e1004870, 2016
Direct coevolutionary couplings reflect biophysical residue interactions in proteins
A Coucke, G Uguzzoni, F Oteri, S Cocco, R Monasson, M Weigt
The Journal of chemical physics 145 (17), 2016
Collective behaviours: from biochemical kinetics to electronic circuits
E Agliari, A Barra, R Burioni, A Di Biasio, G Uguzzoni
Scientific Reports 3 (1), 3458, 2013
Unsupervised inference of protein fitness landscape from deep mutational scan
J Fernandez-de-Cossio-Diaz, G Uguzzoni, A Pagnani
Molecular biology and evolution 38 (1), 318-328, 2021
Learning clinical networks from medical records based on information estimates in mixed-type data
V Cabeli, L Verny, N Sella, G Uguzzoni, M Verny, H Isambert
PLoS computational biology 16 (5), e1007866, 2020
MIIC online: a web server to reconstruct causal or non-causal networks from non-perturbative data
N Sella, L Verny, G Uguzzoni, S Affeldt, H Isambert
Bioinformatics 34 (13), 2311-2313, 2018
The true reinforced random walk with bias
E Agliari, R Burioni, G Uguzzoni
New Journal of Physics 14 (6), 063027, 2012
Analogue neural networks on correlated random graphs
E Agliari, L Asti, A Barra, R Burioni, G Uguzzoni
Journal of Physics A: Mathematical and Theoretical 45 (36), 365001, 2012
Reaction networks as systems for resource allocation: A variational principle for their non-equilibrium steady states
A De Martino, D De Martino, R Mulet, G Uguzzoni
PloS one 7 (7), e39849, 2012
Amala: Analysis of directed evolution experiments via annealed mutational approximated landscape
L Sesta, G Uguzzoni, J Fernandez-de-Cossio-Diaz, A Pagnani
International journal of molecular sciences 22 (20), 10908, 2021
Unsupervised modeling of mutational landscapes of adeno-associated viruses viability
M De Leonardis, J Fernandez-de-Cossio-Diaz, G Uguzzoni, A Pagnani
bioRxiv, 2023.10. 26.564138, 2023
Inference of annealed protein fitness landscapes with AnnealDCA
L Sesta, A Pagnani, J Fernandez-de-Cossio-Diaz, G Uguzzoni
bioRxiv, 2023.05. 19.541442, 2023
Inference and design of antibody specificity: from experiments to models and back
J Fernandez-de-Cossio-Diaz, G Uguzzoni, K Ricard, F Anselmi, C Nizak, ...
bioRxiv, 2023.10. 23.563570, 2023
Computer implemented method to optimize physical-chemical properties of biological sequences
G Uguzzoni, A Pagnani, JFDEC DIA
US Patent App. 17/620,768, 2022
CORRIGENDUM: Collective behaviours: from biochemical kinetics to electronic circuits
E Agliari, A Barra, R Burioni, A Di Biasio, G Uguzzoni
Scientific Reports 3 (3458), 2013
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