Andre Wehe
Andre Wehe
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DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony
A Wehe, MS Bansal, JG Burleigh, O Eulenstein
Bioinformatics 24 (13), 1540-1541, 2008
1502008
Genome-scale phylogenetics: inferring the plant tree of life from 18,896 gene trees
JG Burleigh, MS Bansal, O Eulenstein, S Hartmann, A Wehe, TJ Vision
Systematic Biology 60 (2), 117-125, 2011
1342011
The PhyLoTA Browser: processing GenBank for molecular phylogenetics research
MJ Sanderson, D Boss, D Chen, KA Cranston, A Wehe
Systematic Biology 57 (3), 335-346, 2008
1252008
iGTP: a software package for large-scale gene tree parsimony analysis
R Chaudhary, MS Bansal, A Wehe, D Fernández-Baca, O Eulenstein
BMC bioinformatics 11 (1), 1-7, 2010
862010
Heuristics for the Gene-Duplication Problem: A Θ(n) Speed-Up for the Local Search
MS Bansal, JG Burleigh, O Eulenstein, A Wehe
Annual International Conference on Research in Computational Molecular …, 2007
612007
Locating large-scale gene duplication events through reconciled trees: implications for identifying ancient polyploidy events in plants
JG Burleigh, MS Bansal, A Wehe, O Eulenstein
Journal of Computational Biology 16 (8), 1071-1083, 2009
262009
The gene-duplication problem: Near-linear time algorithms for NNI-based local searches
MS Bansal, O Eulenstein, A Wehe
IEEE/ACM Transactions on Computational Biology and Bioinformatics 6 (2), 221-231, 2009
242009
Locating multiple gene duplications through reconciled trees
JG Burleigh, MS Bansal, A Wehe, O Eulenstein
Annual International Conference on Research in Computational Molecular …, 2008
202008
The importance of run-time error detection
GR Luecke, J Coyle, J Hoekstra, M Kraeva, Y Xu, MY Park, E Kleiman, ...
Tools for High Performance Computing 2009, 145-155, 2010
112010
Efficient algorithms for knowledge-enhanced supertree and supermatrix phylogenetic problems
A Wehe, JG Burleigh, O Eulenstein
IEEE/ACM transactions on computational biology and bioinformatics 10 (6 …, 2012
102012
Scaling the Gene Duplication Problem Towards the Tree of Life.
A Wehe, JG Burleigh, H AlMubaid
BICoB, 133-138, 2010
92010
Algorithms for knowledge-enhanced supertrees
A Wehe, JG Burleigh, O Eulenstein
International Symposium on Bioinformatics Research and Applications, 263-274, 2012
52012
A scalable parallelization of the gene duplication problem
A Wehe, WC Chang, O Eulenstein, S Aluru
Journal of Parallel and Distributed Computing 70 (3), 237-244, 2010
42010
Exact solutions for classic gene tree parsimony problems
WC Chang, A Wehe, P Górecki, O Eulenstein
Proc. of the 5th Int. Conf. on Bioinformatics and Computational Biology, 225-230, 2013
22013
UPC run-time error detection test suite
J Coyle, J Hoekstra, M Kraeva, GR Luecke, E Kleiman, V Srinivas, ...
URL http://kraeva. public. iastate. edu/rted/UPC. TestPlan. pdf, 2008
22008
Large-scale tree parsimony
A Wehe
Digital Repository@ Iowa State University, 2012
2012
Evaluating the Capability of Compilers and Tools to Detect Serial and Parallel Run-time Errors
GR Luecke, J Coyle, J Hoekstra, M Kraeva, Y Xu, MY Park, E Kleiman, ...
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