| KMC 3: counting and manipulating k-mer statistics M Kokot, M Długosz, S Deorowicz Bioinformatics 33 (17), 2759-2761, 2017 | 458 | 2017 |
| KMC 2: fast and resource-frugal k-mer counting S Deorowicz, M Kokot, S Grabowski, A Debudaj-Grabysz Bioinformatics 31 (10), 1569-1576, 2015 | 296 | 2015 |
| Scalable, ultra-fast, and low-memory construction of compacted de Bruijn graphs with Cuttlefish 2 J Khan, M Kokot, S Deorowicz, R Patro Genome biology 23 (1), 190, 2022 | 23 | 2022 |
| Kmer-db: instant evolutionary distance estimation S Deorowicz, A Gudyś, M Długosz, M Kokot, A Danek Bioinformatics 35 (1), 133-136, 2019 | 20 | 2019 |
| Even faster sorting of (not only) integers M Kokot, S Deorowicz, M Długosz Man-Machine Interactions 5: 5th International Conference on Man-Machine …, 2018 | 18 | 2018 |
| Sorting data on ultra-large scale with RADULS: New incarnation of radix sort M Kokot, S Deorowicz, A Debudaj-Grabysz Beyond Databases, Architectures and Structures. Towards Efficient Solutions …, 2017 | 17 | 2017 |
| CoLoRd: Compressing long reads M Kokot, A Gudyś, H Li, S Deorowicz Nature Methods 19 (4), 441-444, 2022 | 12 | 2022 |
| The K-mer File Format: a standardized and compact disk representation of sets of k-mers Y Dufresne, T Lemane, P Marijon, P Peterlongo, A Rahman, M Kokot, ... Bioinformatics 38 (18), 4423-4425, 2022 | 10 | 2022 |
| NOMAD2 provides ultra-efficient, scalable, and unsupervised discovery on raw sequencing reads M Kokot, R Dehghannasiri, TZ Baharav, J Salzman, S Deorowicz bioRxiv, 2023.03. 17.533189, 2023 | 6 | 2023 |
| VCFShark: how to squeeze a VCF file S Deorowicz, A Danek, M Kokot Bioinformatics 37 (19), 3358-3360, 2021 | 4 | 2021 |
| Improvements in DNA Reads Correction M Długosz, S Deorowicz, M Kokot Man-Machine Interactions 5: 5th International Conference on Man-Machine …, 2018 | 2 | 2018 |
| Ultra-efficient, unified discovery from microbial sequencing with SPLASH and precise statistical assembly G Henderson, A Gudys, T Baharav, P Sundaramurthy, M Kokot, PL Wang, ... bioRxiv, 2024.01. 18.576133, 2024 | | 2024 |
| Even better correction of genome sequencing data M Dlugosz, S Deorowicz, M Kokot arXiv preprint arXiv:1703.00690, 2017 | | 2017 |
| K-MER COUNTING PROBLEM M KOKOT, S DEOROWICZ | | |
| Wyznaczanie zbiorów podsłów sekwencji nukleotydowych w danych z sekwencjonowania genomów M Kokot | | |
Sebastian DeorowiczSilesian University of TechnologyVerified email at polsl.pl
