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T. M. Murali
Tytuł
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Extracting conserved gene expression motifs from gene expression data
TM Murali, S Kasif
Biocomputing 2003, 77-88, 2002
5272002
A Monte Carlo algorithm for fast projective clustering
CM Procopiuc, M Jones, PK Agarwal, TM Murali
Proceedings of the 2002 ACM SIGMOD international conference on Management of …, 2002
5092002
Benchmarking algorithms for gene regulatory network inference from single-cell transcriptomic data
A Pratapa, AP Jalihal, JN Law, A Bharadwaj, TM Murali
Nature methods 17 (2), 147-154, 2020
4402020
Whole-genome annotation by using evidence integration in functional-linkage networks
U Karaoz, TM Murali, S Letovsky, Y Zheng, C Ding, CR Cantor, S Kasif
Proceedings of the National Academy of Sciences 101 (9), 2888-2893, 2004
4072004
The landscape of human proteins interacting with viruses and other pathogens
MD Dyer, TM Murali, BW Sobral
PLoS pathogens 4 (2), e32, 2008
3662008
RankGene: identification of diagnostic genes based on expression data
Y Su, TM Murali, V Pavlovic, M Schaffer, S Kasif
Bioinformatics 19 (12), 1578-1579, 2003
2412003
Computational prediction of host-pathogen protein–protein interactions
MD Dyer, TM Murali, BW Sobral
Bioinformatics 23 (13), i159-i166, 2007
2092007
Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin
JZ Ruscio, D Kumar, M Shukla, MG Prisant, TM Murali, AV Onufriev
Proceedings of the National Academy of Sciences 105 (27), 9204-9209, 2008
1552008
The human-bacterial pathogen protein interaction networks of Bacillus anthracis, Francisella tularensis, and Yersinia pestis
MD Dyer, C Neff, M Dufford, CG Rivera, D Shattuck, J Bassaganya-Riera, ...
PloS one 5 (8), e12089, 2010
1542010
Consistent solid and boundary representations from arbitrary polygonal data
TM Murali, TA Funkhouser
Proceedings of the 1997 symposium on Interactive 3D graphics, 155-ff., 1997
1541997
New similarity measures between polylines with applications to morphing and polygon sweeping
A Efrat, LJ Guibas, JSB Har-Peled, Sariel, Mitchell, TM Murali
Discrete & Computational Geometry 28 (4), 535-569, 2002
1172002
Supervised learning and prediction of physical interactions between human and HIV proteins
MD Dyer, TM Murali, BW Sobral
Infection, Genetics and Evolution 11 (5), 917-923, 2011
1102011
Sweeping simple polygons with a chain of guards
A Efrat, LJ Guibas, S Har-Peled, DC Lin, JSB Mitchell, TM Murali
Proceedings of the eleventh annual ACM-SIAM symposium on Discrete algorithms …, 2000
1102000
The art of gene function prediction
TM Murali, CJ Wu, S Kasif
Nature biotechnology 24 (12), 1474-1475, 2006
972006
Planning robot motion strategies for efficient model construction
H González-Baños, E Mao, JC Latombe, TM Murali, A Efrat
Robotics Research: The Ninth International Symposium, 345-352, 2000
972000
Response diversity of Arabidopsis thaliana ecotypes in elevated [CO2] in the field
P Li, A Sioson, SP Mane, A Ulanov, G Grothaus, LS Heath, TM Murali, ...
Plant molecular biology 62, 593-609, 2006
852006
I/O-efficient algorithms for contour line extraction and planar graph blocking
PK Agarwal, L Arge, TM Murali, V Kasturi R, JS Vitter
Society for Industrial and Applied Mathematics, 1998
801998
Cylindrical static and kinetic binary space partitions
PK Agarwal, LJ Guibas, TM Murali, JS Vitter
Proceedings of the thirteenth annual symposium on Computational geometry, 39-48, 1997
761997
PIG—the pathogen interaction gateway
T Driscoll, MD Dyer, TM Murali, BW Sobral
Nucleic acids research 37 (suppl_1), D647-D650, 2009
732009
From START to FINISH: computational analysis of cell cycle control in budding yeast
P Kraikivski, KC Chen, T Laomettachit, TM Murali, JJ Tyson
NPJ systems biology and applications 1 (1), 1-9, 2015
712015
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