|MicroRNA expression characterizes oligometastasis (es)|
YA Lussier, HR Xing, JK Salama, NN Khodarev, Y Huang, Q Zhang, ...
PLoS One 6 (12), e28650, 2011
|Differentiation of human pluripotent stem cells to cells similar to cord-blood endothelial colony–forming cells|
N Prasain, MR Lee, S Vemula, JL Meador, M Yoshimoto, MJ Ferkowicz, ...
Nature biotechnology 32 (11), 1151-1157, 2014
|Network modeling identifies molecular functions targeted by miR-204 to suppress head and neck tumor metastasis|
Y Lee, X Yang, Y Huang, H Fan, Q Zhang, Y Wu, J Li, R Hasina, C Cheng, ...
PLoS computational biology 6 (4), e1000730, 2010
|ECgene: genome annotation for alternative splicing|
P Kim, N Kim, Y Lee, B Kim, Y Shin, S Lee
Nucleic acids research 33 (suppl_1), D75-D79, 2005
|Variants affecting exon skipping contribute to complex traits|
Y Lee, ER Gamazon, E Rebman, Y Lee, S Lee, ME Dolan, NJ Cox, ...
PLoS genetics 8 (10), e1002998, 2012
|ECgene: an alternative splicing database update|
Y Lee, Y Lee, B Kim, Y Shin, S Nam, P Kim, N Kim, WH Chung, J Kim, ...
Nucleic acids research 35 (suppl_1), D99-D103, 2007
|Protein interaction network underpins concordant prognosis among heterogeneous breast cancer signatures|
J Chen, L Sam, Y Huang, Y Lee, J Li, Y Liu, HR Xing, YA Lussier
Journal of biomedical informatics 43 (3), 385-396, 2010
|Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases|
Y Lee, H Li, J Li, E Rebman, I Achour, KE Regan, ER Gamazon, JL Chen, ...
Journal of the American Medical Informatics Association 20 (4), 619-629, 2013
|Complex-disease networks of trait-associated single-nucleotide polymorphisms (SNPs) unveiled by information theory|
H Li, Y Lee, JL Chen, E Rebman, J Li, YA Lussier
Journal of the American Medical Informatics Association 19 (2), 295-305, 2012
|A variant at 9p21. 3 functionally implicates CDKN2B in paediatric B-cell precursor acute lymphoblastic leukaemia aetiology|
EA Hungate, SR Vora, ER Gamazon, T Moriyama, T Best, I Hulur, Y Lee, ...
Nature communications 7 (1), 1-11, 2016
|Identification of epigenetic interactions between miRNA and DNA methylation associated with gene expression as potential prognostic markers in bladder cancer|
M Shivakumar, Y Lee, L Bang, T Garg, KA Sohn, D Kim
BMC medical genomics 10 (1), 65-75, 2017
|GO-Module: functional synthesis and improved interpretation of Gene Ontology patterns|
X Yang, J Li, Y Lee, YA Lussier
Bioinformatics 27 (10), 1444-1446, 2011
|Population-dependent intron retention and DNA methylation in breast Cancer|
D Kim, M Shivakumar, S Han, MS Sinclair, YJ Lee, Y Zheng, OI Olopade, ...
Molecular Cancer Research 16 (3), 461-469, 2018
|Integrative genomics analyses unveil downstream biological effectors of disease-specific polymorphisms buried in intergenic regions|
H Li, I Achour, L Bastarache, J Berghout, V Gardeux, J Li, Y Lee, L Pesce, ...
NPJ genomic medicine 1 (1), 1-12, 2016
|Identification of exon skipping events associated with Alzheimer’s disease in the human hippocampus|
S Han, JE Miller, S Byun, D Kim, SL Risacher, AJ Saykin, Y Lee, K Nho
BMC medical genomics 12 (1), 51-61, 2019
|The effects of alternative splicing on miRNA binding sites in bladder cancer|
S Han, D Kim, M Shivakumar, YJ Lee, T Garg, JE Miller, JH Kim, D Kim, ...
PloS one 13 (1), e0190708, 2018
|Genetic variation affecting exon skipping contributes to brain structural atrophy in Alzheimer’s disease|
Y Lee, S Han, D Kim, D Kim, E Horgousluoglu, SL Risacher, AJ Saykin, ...
AMIA Summits on Translational Science Proceedings 2018, 124, 2018
|Evidence of selection on splicing-associated loci in human populations and relevance to disease loci mapping|
ER Gamazon, A Konkashbaev, EM Derks, NJ Cox, Y Lee
Scientific reports 7 (1), 1-15, 2017
|Differential alternative splicing regulation among hepatocellular carcinoma with different risk factors|
YJ Jin, S Byun, S Han, J Chamberlin, D Kim, MJ Kim, Y Lee
BMC medical genomics 12 (8), 1-12, 2019
|CAS-viewer: web-based tool for splicing-guided integrative analysis of multi-omics cancer data|
S Han, D Kim, Y Kim, K Choi, JE Miller, D Kim, Y Lee
BMC medical genomics 11 (2), 105-116, 2018