Jose C. Clemente
TitleCited byYear
UCHIME improves sensitivity and speed of chimera detection
RC Edgar, BJ Haas, JC Clemente, C Quince, R Knight
Bioinformatics 27 (16), 2194-2200, 2011
71992011
Structure, function and diversity of the healthy human microbiome
Human Microbiome Project Consortium
Nature 486 (7402), 207-214, 2012
4633*2012
Human gut microbiome viewed across age and geography
T Yatsunenko, FE Rey, MJ Manary, I Trehan, MG Dominguez-Bello, ...
Nature 486 (7402), 222-227, 2012
39702012
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
MGI Langille, J Zaneveld, JG Caporaso, D McDonald, D Knights, ...
Nature Biotechnology, 2013
32272013
Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice
VK Ridaura, JJ Faith, FE Rey, J Cheng, AE Duncan, AL Kau, NW Griffin, ...
Science 341 (6150), 1241214, 2013
19992013
The impact of the gut microbiota on human health: an integrative view
JC Clemente, LK Ursell, LW Parfrey, R Knight
Cell 148 (6), 1258-1270, 2012
19512012
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
Nature 486 (7402), 215, 2012
12792012
A framework for human microbiome research
Human Microbiome Project Consortium
Nature 486 (7402), 215-221, 2012
1275*2012
Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans
BD Muegge, J Kuczynski, D Knights, JC Clemente, A González, ...
Science 332 (6032), 970-974, 2011
11262011
The long-term stability of the human gut microbiota
JJ Faith, JL Guruge, M Charbonneau, S Subramanian, H Seedorf, ...
Science 341 (6141), 1237439, 2013
10322013
Cohabiting family members share microbiota with one another and with their dogs
SJ Song, C Lauber, EK Costello, CA Lozupone, G Humphrey, ...
Elife 2, e00458, 2013
5102013
Experimental and analytical tools for studying the human microbiome
J Kuczynski, CL Lauber, WA Walters, LW Parfrey, JC Clemente, D Gevers, ...
Nature Reviews Genetics 13 (1), 47-58, 2012
5062012
Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer
MG Dominguez-Bello, KM De Jesus-Laboy, N Shen, LM Cox, A Amir, ...
Nature medicine 22 (3), 250-253, 2016
4432016
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 2017
4262017
The microbiome of uncontacted Amerindians
JC Clemente, EC Pehrsson, MJ Blaser, K Sandhu, Z Gao, B Wang, ...
Science Advances 1 (3), e1500183, 2015
4132015
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome
D McDonald, JC Clemente, J Kuczynski, JR Rideout, J Stombaugh, ...
GigaScience 1 (1), 7, 2012
3692012
Consistent, comprehensive and computationally efficient OTU definitions
JR Rideout, Y He, JA Navas-Molina, WA Walters, LK Ursell, SM Gibbons, ...
PeerJ PrePrints, 2014
343*2014
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
JR Rideout, Y He, JA Navas-Molina, WA Walters, LK Ursell, SM Gibbons, ...
PeerJ 2, e545, 2014
3422014
The microbiome in early life: implications for health outcomes
S Tamburini, N Shen, HC Wu, JC Clemente
Nature Medicine 22 (7), 713-722, 2016
2982016
Reconstructing the Microbial Diversity and Function of Pre-Agricultural Tallgrass Prairie Soils in the United States
N Fierer, J Ladau, JC Clemente, JW Leff, SM Owens, KS Pollard, R Knight, ...
Science 342 (6158), 621-624, 2013
2892013
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Articles 1–20