Jessica L. Metcalf
Jessica L. Metcalf
Associate Professor, Colorado State University, Fort Collins, CO
Verified email at colostate.edu - Homepage
Title
Cited by
Cited by
Year
Animals in a bacterial world, a new imperative for the life sciences
M McFall-Ngai, MG Hadfield, TCG Bosch, HV Carey, T Domazet-Lošo, ...
Proceedings of the National Academy of Sciences 110 (9), 3229-3236, 2013
14662013
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
6422017
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
5662019
Longitudinal analysis of microbial interaction between humans and the indoor environment
S Lax, DP Smith, J Hampton-Marcell, SM Owens, KM Handley, NM Scott, ...
Science 345 (6200), 1048-1052, 2014
5292014
The microbiome of uncontacted Amerindians
JC Clemente, EC Pehrsson, MJ Blaser, K Sandhu, Z Gao, B Wang, ...
Science advances 1 (3), e1500183, 2015
4882015
Defining the human microbiome
LK Ursell, JL Metcalf, LW Parfrey, R Knight
Nutrition reviews 70 (suppl_1), S38-S44, 2012
4762012
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
3482018
Subsistence strategies in traditional societies distinguish gut microbiomes
AJ Obregon-Tito, RY Tito, J Metcalf, K Sankaranarayanan, JC Clemente, ...
Nature communications 6 (1), 1-9, 2015
2512015
Microbial community assembly and metabolic function during mammalian corpse decomposition
JL Metcalf, ZZ Xu, S Weiss, S Lax, W Van Treuren, ER Hyde, SJ Song, ...
Science 351 (6269), 158-162, 2016
2222016
A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system
JL Metcalf, LW Parfrey, A Gonzalez, CL Lauber, D Knights, G Ackermann, ...
elife 2, e01104, 2013
1952013
Convergence of gut microbiomes in myrmecophagous mammals
F Delsuc, JL Metcalf, L Wegener Parfrey, SJ Song, A González, R Knight
Molecular ecology 23 (6), 1301-1317, 2014
1752014
Evolutionary demography of monocarpic perennials
JC Metcalf, KE Rose, M Rees
Trends in Ecology & Evolution 18 (9), 471-480, 2003
1682003
Preservation methods differ in fecal microbiome stability, affecting suitability for field studies
SJ Song, A Amir, JL Metcalf, KR Amato, ZZ Xu, G Humphrey, R Knight
MSystems 1 (3), 2016
1562016
Insights from characterizing extinct human gut microbiomes
RY Tito, D Knights, J Metcalf, AJ Obregon-Tito, L Cleeland, F Najar, B Roe, ...
PloS one 7 (12), e51146, 2012
1502012
Revising the recent evolutionary history of equids using ancient DNA
L Orlando, JL Metcalf, MT Alberdi, M Telles-Antunes, D Bonjean, M Otte, ...
Proceedings of the National Academy of Sciences 106 (51), 21754-21759, 2009
1472009
American Gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), e00031-18, 2018
1432018
Tracking down the sources of experimental contamination in microbiome studies
S Weiss, A Amir, ER Hyde, JL Metcalf, SJ Song, R Knight
Genome biology 15 (12), 1-3, 2014
1062014
The effects of captivity on the mammalian gut microbiome
VJ McKenzie, SJ Song, F Delsuc, TL Prest, AM Oliverio, TM Korpita, ...
Integrative and comparative biology 57 (4), 690-704, 2017
952017
Balance trees reveal microbial niche differentiation
JT Morton, J Sanders, RA Quinn, D McDonald, A Gonzalez, ...
MSystems 2 (1), 2017
932017
Our microbial selves: what ecology can teach us
A Gonzalez, JC Clemente, A Shade, JL Metcalf, S Song, B Prithiviraj, ...
EMBO reports 12 (8), 775-784, 2011
872011
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Articles 1–20