Sean M. Gibbons
Sean M. Gibbons
Assistant Professor of Systems Biology, Institute for Systems Biology
Verified email at isbscience.org - Homepage
Title
Cited by
Cited by
Year
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
1026*2019
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017
6692017
Longitudinal analysis of microbial interaction between humans and the indoor environment
S Lax, DP Smith, J Hampton-Marcell, SM Owens, KM Handley, NM Scott, ...
Science 345 (6200), 1048-1052, 2014
5412014
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
JR Rideout, Y He, JA Navas-Molina, WA Walters, LK Ursell, SM Gibbons, ...
PeerJ 2, e545, 2014
4052014
Effects of diurnal variation of gut microbes and high-fat feeding on host circadian clock function and metabolism
V Leone, SM Gibbons, K Martinez, AL Hutchison, EY Huang, CM Cham, ...
Cell host & microbe 17 (5), 681-689, 2015
3352015
Meta-analysis of gut microbiome studies identifies disease-specific and shared responses
C Duvallet, SM Gibbons, T Gurry, RA Irizarry, EJ Alm
Nature communications 8 (1), 1-10, 2017
2672017
Whole-grain wheat consumption reduces inflammation in a randomized controlled trial on overweight and obese subjects with unhealthy dietary and lifestyle behaviors: role ofá…
P Vitaglione, I Mennella, R Ferracane, AA Rivellese, R Giacco, D Ercolini, ...
The American journal of clinical nutrition 101 (2), 251-261, 2015
1962015
Evidence for a persistent microbial seed bank throughout the global ocean
SM Gibbons, JG Caporaso, M Pirrung, D Field, R Knight, JA Gilbert
Proceedings of the National Academy of Sciences 110 (12), 4651-4655, 2013
1872013
454‐sequencing reveals stochastic local reassembly and high disturbance tolerance within arbuscular mycorrhizal fungal communities
Y Lekberg, T Schnoor, R Kj°ller, SM Gibbons, LH Hansen, WA Al‐Soud, ...
Journal of Ecology, 2011
1592011
Severe plant invasions can increase mycorrhizal fungal abundance and diversity
Y Lekberg, SM Gibbons, S Rosendahl, PW Ramsey
The ISME journal 7 (7), 1424-1433, 2013
1412013
Spatial scale drives patterns in soil bacterial diversity
SL O'Brien, SM Gibbons, SM Owens, J Hampton‐Marcell, ER Johnston, ...
Environmental microbiology 18 (6), 2039-2051, 2016
1072016
Forensic analysis of the microbiome of phones and shoes
S Lax, JT Hampton-Marcell, SM Gibbons, GB Colares, D Smith, JA Eisen, ...
Microbiome 3 (1), 1-8, 2015
962015
Human and environmental impacts on river sediment microbial communities
SM Gibbons, E Jones, A Bearquiver, F Blackwolf, W Roundstone, N Scott, ...
PloS one 9 (5), e97435, 2014
902014
Ecological succession and viability of human-associated microbiota on restroom surfaces
SM Gibbons, T Schwartz, J Fouquier, M Mitchell, N Sangwan, JA Gilbert, ...
Applied and environmental microbiology 81 (2), 765-773, 2015
812015
Investigating the impact of storage conditions on microbial community composition in soil samples
BER Rubin, SM Gibbons, S Kennedy, J Hampton-Marcell, S Owens, ...
PloS one 8 (7), e70460, 2013
722013
Adaptive evolution within gut microbiomes of healthy people
S Zhao, TD Lieberman, M Poyet, KM Kauffman, SM Gibbons, M Groussin, ...
Cell host & microbe 25 (5), 656-667. e8, 2019
70*2019
Characterization of the salivary microbiome in patients with pancreatic cancer
PJ Torres, EM Fletcher, SM Gibbons, M Bouvet, KS Doran, ST Kelley
PeerJ 3, e1373, 2015
702015
Characterizing changes in soil bacterial community structure in response to short-term warming
J Xiong, H Sun, F Peng, H Zhang, X Xue, SM Gibbons, JA Gilbert, H Chu
FEMS Microbiology Ecology 89 (2), 281-292, 2014
672014
Microbial diversity—exploration of natural ecosystems and microbiomes
SM Gibbons, JA Gilbert
Current opinion in genetics & development 35, 66-72, 2015
562015
Ocean acidification shows negligible impacts on high-latitude bacterial community structure in coastal pelagic mesocosms
AS Roy, SM Gibbons, H Schunck, S Owens, JG Caporaso, M Sperling, ...
Biogeosciences 10 (1), 555-566, 2013
542013
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