Junichi Tsujii
Junichi Tsujii
Artificial Intelligence Research Center, AIST
Verified email at aist.go.jp
TitleCited byYear
GENIA corpus—a semantically annotated corpus for bio-textmining
JD Kim, T Ohta, Y Tateisi, J Tsujii
Bioinformatics 19 (suppl_1), i180-i182, 2003
10042003
Overview of BioNLP'09 shared task on event extraction
JD Kim, T Ohta, S Pyysalo, Y Kano, J Tsujii
Proceedings of the Workshop on Current Trends in Biomedical Natural Language …, 2009
6182009
BRAT: a web-based tool for NLP-assisted text annotation
P Stenetorp, S Pyysalo, G Topić, T Ohta, S Ananiadou, J Tsujii
Proceedings of the Demonstrations at the 13th Conference of the European …, 2012
5952012
Developing a robust part-of-speech tagger for biomedical text
Y Tsuruoka, Y Tateishi, JD Kim, T Ohta, J McNaught, S Ananiadou, ...
Panhellenic Conference on Informatics, 382-392, 2005
5362005
Corpus annotation for mining biomedical events from literature
JD Kim, T Ohta, J Tsujii
BMC bioinformatics 9 (1), 10, 2008
3792008
Text mining and its potential applications in systems biology
S Ananiadou, DB Kell, J Tsujii
Trends in biotechnology 24 (12), 571-579, 2006
3722006
Accomplishments and challenges in literature data mining for biology
L Hirschman, JC Park, J Tsujii, L Wong, CH Wu
Bioinformatics 18 (12), 1553-1561, 2002
3702002
Extracting the names of genes and gene products with a hidden Markov model
N Collier, C Nobata, J Tsujii
Proceedings of the 18th conference on Computational linguistics-Volume 1 …, 2000
3342000
Tuning support vector machines for biomedical named entity recognition
J Kazama, T Makino, Y Ohta, J Tsujii
Proceedings of the ACL-02 workshop on Natural language processing in the …, 2002
3092002
Event extraction from biomedical papers using a full parser
A Yakushiji, Y Tateisi, Y Miyao, J Tsujii
Biocomputing 2001, 408-419, 2000
3002000
Identifying the interaction between genes and gene products based on frequently seen verbs in medline abstracts
T Sekimizu, HS Park, J Tsujii
Genome informatics 9, 62-71, 1998
2881998
Bidirectional inference with the easiest-first strategy for tagging sequence data
Y Tsuruoka, J Tsujii
Proceedings of the conference on human language technology and empirical …, 2005
2702005
Probabilistic CFG with latent annotations
T Matsuzaki, Y Miyao, J Tsujii
Proceedings of the 43rd annual meeting on Association for Computational …, 2005
2702005
Dependency `arsing and Domain Adaptation with LR Models and Parser Ensembles
K Sagae, J Tsujii
EMNLP-CoNLL 2007, 1044-1050, 2007
260*2007
The C-value/NC-value Method of Automatic Recognition for Multi-word Terms
KT Frantzi, S Ananiadou, J Tsujii
International conference on theory and practice of digital libraries, 585-604, 1998
2261998
Event extraction for systems biology by text mining the literature
S Ananiadou, S Pyysalo, J Tsujii, DB Kell
Trends in biotechnology 28 (7), 381-390, 2010
2232010
Feature forest models for probabilistic HPSG parsing
Y Miyao, J Tsujii
Computational linguistics 34 (1), 35-80, 2008
2222008
Stochastic gradient descent training for l1-regularized log-linear models with cumulative penalty
Y Tsuruoka, J Tsujii, S Ananiadou
Proceedings of the Joint Conference of the 47th Annual Meeting of the ACL …, 2009
2092009
Event extraction with complex event classification using rich features
M Miwa, R Sætre, JD Kim, J Tsujii
Journal of bioinformatics and computational biology 8 (01), 131-146, 2010
1812010
Evaluating contributions of natural language parsers to protein–protein interaction extraction
Y Miyao, K Sagae, R Sætre, T Matsuzaki, J Tsujii
Bioinformatics 25 (3), 394-400, 2008
1762008
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