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Abhishek Subramanian
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Single-cell RNA sequencing maps endothelial metabolic plasticity in pathological angiogenesis
K Rohlenova, J Goveia, M García-Caballero, A Subramanian, J Kalucka, ...
Cell metabolism 31 (4), 862-877. e14, 2020
1912020
BIOMEX: an interactive workflow for (single cell) omics data interpretation and visualization
F Taverna, J Goveia, TK Karakach, S Khan, K Rohlenova, L Treps, ...
Nucleic acids research 48 (W1), W385-W394, 2020
472020
An integrative machine learning strategy for improved prediction of essential genes in Escherichia coli metabolism using flux-coupled features
S Nandi, A Subramanian, RR Sarkar
Molecular BioSystems 13 (8), 1584-1596, 2017
382017
Optimal combinations of control strategies and cost-effective analysis for visceral leishmaniasis disease transmission
S Biswas, A Subramanian, IM ELMojtaba, J Chattopadhyay, RR Sarkar
PLoS One 12 (2), e0172465, 2017
372017
Comparison of codon usage bias across Leishmania and Trypanosomatids to understand mRNA secondary structure, relative protein abundance and pathway functions
A Subramanian, RR Sarkar
Genomics 106 (4), 232-241, 2015
282015
Dissecting Leishmania infantum Energy Metabolism - A Systems Perspective
A Subramanian, J Jhawar, RR Sarkar
PLoS One 10 (9), e0137976, 2015
272015
Revealing the mystery of metabolic adaptations using a genome scale model of Leishmania infantum
A Subramanian, RR Sarkar
Scientific Reports 7 (doi:10.1038/s41598-017-10743-x), 10262, 2017
202017
The pulmonary vasculature in lethal COVID-19 and idiopathic pulmonary fibrosis at single-cell resolution
LPMH De Rooij, LM Becker, LA Teuwen, B Boeckx, S Jansen, S Feys, ...
Cardiovascular research 119 (2), 520-535, 2023
162023
Data in support of large scale comparative codon usage analysis in Leishmania and Trypanosomatids
A Subramanian, RR Sarkar
Data in Brief 4, 269-272, 2015
132015
Exploring the differences in metabolic behavior of astrocyte and glioblastoma: a flux balance analysis approach
R Bhowmick, A Subramanian, RR Sarkar
Systems and synthetic biology 9, 159-177, 2015
102015
Understanding visceral leishmaniasis disease transmission and its control—a study based on mathematical modeling
A Subramanian, V Singh, RR Sarkar
Mathematics 3 (3), 913-944, 2015
102015
NETWORK STRUCTURE AND ENZYMATIC EVOLUTION IN LEISHMANIA METABOLISM: A COMPUTATIONAL STUDY
A Subramanian, RR Sarkar
BIOMAT 2015: International Symposium on Mathematical and Computational …, 2016
72016
Perspectives on Leishmania species and stage-specific adaptive mechanisms
A Subramanian, RR Sarkar
Trends in parasitology 34 (12), 1068-1081, 2018
62018
Exploring the role of GS–GOGAT cycle in microcystin synthesis and regulation–a model based analysis
S Banerjee, A Subramanian, J Chattopadhyay, RR Sarkar
Molecular BioSystems 13 (12), 2603-2614, 2017
52017
Angiogenesis goes computational–The future way forward to discover new angiogenic targets?
A Subramanian, P Zakeri, M Mousa, H Alnaqbi, FY Alshamsi, L Bettoni, ...
Computational and Structural Biotechnology Journal 20, 5235-5255, 2022
42022
Endothelial metabolism going single
A Subramanian, LM Becker, P Carmeliet
Nature Metabolism 3, 593–594, 2021
22021
BIOMEX: a software to alleviate the bottlenecks in the analysis-to-interpretation pipeline of omics datasets
F Taverna
2021
Method of Identification of Combinatorial Enzymatic Reaction Targets in Glioblastoma Specific Metabolic Network
RR Sarkar, R Bhowmick, A Subramanian
US Patent App. 15/779,798, 2018
2018
Evolutionary Perspectives of Genotype–Phenotype Factors in Leishmania Metabolism
A Subramanian, RR Sarkar
Journal of Molecular Evolution 86, 443-456, 2018
2018
Computational investigation of stage-specific and species specific factors of the leishmania parasite to understand the survival strategies
A Subramanian
Ph.D Thesis, 2018, 2018
2018
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Articles 1–20