Eckart Bindewald
Eckart Bindewald
Frederick National Laboratory for Cancer Research
Zweryfikowany adres z mail.nih.gov
Cytowane przez
Cytowane przez
In vitro assembly of cubic RNA-based scaffolds designed in silico
KA Afonin, E Bindewald, AJ Yaghoubian, N Voss, E Jacovetty, BA Shapiro, ...
Nature nanotechnology 5 (9), 676-682, 2010
Bridging the gap in RNA structure prediction
BA Shapiro, YG Yingling, W Kasprzak, E Bindewald
Current opinion in structural biology 17 (2), 157-165, 2007
Design and self-assembly of siRNA-functionalized RNA nanoparticles for use in automated nanomedicine
KA Afonin, WW Grabow, FM Walker, E Bindewald, MA Dobrovolskaia, ...
Nature protocols 6 (12), 2022-2034, 2011
RNAJunction: a database of RNA junctions and kissing loops for three-dimensional structural analysis and nanodesign
E Bindewald, R Hayes, YG Yingling, W Kasprzak, BA Shapiro
Nucleic acids research 36 (suppl_1), D392-D397, 2008
The favorable IFNL3 genotype escapes mRNA decay mediated by AU-rich elements and hepatitis C virus–induced microRNAs
AP McFarland, SM Horner, A Jarret, RC Joslyn, E Bindewald, BA Shapiro, ...
Nature immunology 15 (1), 72-79, 2014
RNA secondary structure prediction from sequence alignments using a network of k-nearest neighbor classifiers
E Bindewald, BA Shapiro
Rna 12 (3), 342-352, 2006
Computational strategies for the automated design of RNA nanoscale structures from building blocks using NanoTiler
E Bindewald, C Grunewald, B Boyle, M O’Connor, BA Shapiro
Journal of Molecular Graphics and Modelling 27 (3), 299-308, 2008
In Silico Design and Enzymatic Synthesis of Functional RNA Nanoparticles
KA Afonin, WK Kasprzak, E Bindewald, M Kireeva, M Viard, M Kashlev, ...
Accounts of chemical research 47 (6), 1731-1741, 2014
Multistrand RNA secondary structure prediction and nanostructure design including pseudoknots
E Bindewald, K Afonin, L Jaeger, BA Shapiro
ACS nano 5 (12), 9542-9551, 2011
A divide and conquer approach to fast loop modeling
SCE Tosatto, E Bindewald, J Hesser, R Männer
Protein engineering 15 (4), 279-286, 2002
Functionally-interdependent shape-switching nanoparticles with controllable properties
JR Halman, E Satterwhite, B Roark, M Chandler, M Viard, A Ivanina, ...
Nucleic acids research 45 (4), 2210-2220, 2017
Co-transcriptional production of RNA–DNA hybrids for simultaneous release of multiple split functionalities
KA Afonin, R Desai, M Viard, ML Kireeva, E Bindewald, CL Case, ...
Nucleic acids research 42 (3), 2085-2097, 2014
Computational and experimental characterization of RNA cubic nanoscaffolds
KA Afonin, W Kasprzak, E Bindewald, PS Puppala, AR Diehl, KT Hall, ...
Methods 67 (2), 256-265, 2014
CyloFold: secondary structure prediction including pseudoknots
E Bindewald, T Kluth, BA Shapiro
Nucleic acids research 38 (suppl_2), W368-W372, 2010
Multistrand structure prediction of nucleic acid assemblies and design of RNA switches
E Bindewald, KA Afonin, M Viard, P Zakrevsky, T Kim, BA Shapiro
Nano letters 16 (3), 1726-1735, 2016
Cellular delivery of RNA nanoparticles
L Parlea, A Puri, W Kasprzak, E Bindewald, P Zakrevsky, E Satterwhite, ...
ACS combinatorial science 18 (9), 527-547, 2016
The SSEA server for protein secondary structure alignment
P Fontana, E Bindewald, S Toppo, R Velasco, G Valle, SCE Tosatto
Bioinformatics 21 (3), 393-395, 2005
The use of minimal RNA toeholds to trigger the activation of multiple functionalities
KA Afonin, M Viard, P Tedbury, E Bindewald, L Parlea, M Howington, ...
Nano letters 16 (3), 1746-1753, 2016
Protocols for the In Silico Design of RNA Nanostructures
BA Shapiro, E Bindewald, W Kasprzak, Y Yingling
Nanostructure Design: Methods and Protocols, 93-115, 2008
Genomic analyses reveal broad impact of miR-137 on genes associated with malignant transformation and neuronal differentiation in glioblastoma cells
S Tamim, DT Vo, PJ Uren, M Qiao, E Bindewald, WK Kasprzak, ...
PloS one 9 (1), e85591, 2014
Nie można teraz wykonać tej operacji. Spróbuj ponownie później.
Prace 1–20