| Seeing the trees through the forest: sequence-based homo-and heteromeric protein-protein interaction sites prediction using random forest Q Hou, PFG De Geest, WF Vranken, J Heringa, KA Feenstra Bioinformatics 33 (10), 1479-1487, 2017 | 69 | 2017 |
| Parents’ decisions to vaccinate children against COVID-19: A scoping review F Pan, H Zhao, S Nicholas, E Maitland, R Liu, Q Hou Vaccines 9 (12), 1476, 2021 | 64 | 2021 |
| Computational analysis of the amino acid interactions that promote or decrease protein solubility Q Hou, R Bourgeas, F Pucci, M Rooman Scientific reports 8 (1), 14661, 2018 | 63 | 2018 |
| SOLart: a structure-based method to predict protein solubility and aggregation Q Hou, JM Kwasigroch, M Rooman, F Pucci Bioinformatics 36 (5), 1445-1452, 2020 | 53 | 2020 |
| A comprehensive computational study of amino acid interactions in membrane proteins MN Mbaye, Q Hou, S Basu, F Teheux, F Pucci, M Rooman Scientific reports 9 (1), 12043, 2019 | 53 | 2019 |
| SeRenDIP-CE: sequence-based interface prediction for conformational epitopes Q Hou, B Stringer, K Waury, H Capel, R Haydarlou, F Xue, S Abeln, ... Bioinformatics 37 (20), 3421-3427, 2021 | 23 | 2021 |
| Club-martini: selecting favourable interactions amongst available candidates, a coarse-grained simulation approach to scoring docking decoys Q Hou, MF Lensink, J Heringa, KA Feenstra PloS one 11 (5), e0155251, 2016 | 22 | 2016 |
| SeRenDIP: SEquential REmasteriNg to DerIve profiles for fast and accurate predictions of PPI interface positions Q Hou, PFG De Geest, CJ Griffioen, S Abeln, J Heringa, KA Feenstra Bioinformatics 35 (22), 4794-4796, 2019 | 19 | 2019 |
| Sequence specificity between interacting and non-interacting homologs identifies interface residues–a homodimer and monomer use case Q Hou, BE Dutilh, MA Huynen, J Heringa, KA Feenstra BMC bioinformatics 16, 1-12, 2015 | 18 | 2015 |
| SWOTein: a structure-based approach to predict stability strengths and weaknesses of prOTEINs Q Hou, F Pucci, F Ancien, JM Kwasigroch, R Bourgeas, M Rooman Bioinformatics 37 (14), 1963-1971, 2021 | 11 | 2021 |
| Ten quick tips for sequence-based prediction of protein properties using machine learning Q Hou, K Waury, D Gogishvili, KA Feenstra PLOS Computational Biology 18 (12), e1010669, 2022 | 7 | 2022 |
| Using metagenomic data to boost protein structure prediction and discovery Q Hou, F Pucci, F Pan, F Xue, M Rooman, Q Feng Computational and Structural Biotechnology Journal 20, 434-442, 2022 | 6 | 2022 |
| Enzyme stability-activity trade-off: new insights from protein stability weaknesses and evolutionary conservation Q Hou, M Rooman, F Pucci Journal of chemical theory and computation 19 (12), 3664-3671, 2023 | 4 | 2023 |
| MPI-VGAE: protein–metabolite enzymatic reaction link learning by variational graph autoencoders C Wang, C Yuan, Y Wang, R Chen, Y Shi, T Zhang, F Xue, GJ Patti, L Wei, ... Briefings in bioinformatics 24 (4), bbad189, 2023 | 1 | 2023 |
| From the hydrophobic core to the globular-disorder interface: New challenges and insights into protein design S Basu, D Chakravarty, Q Hou, VN Uversky Frontiers in Molecular Biosciences 10, 1151676, 2023 | 1 | 2023 |
| Macrophage AHR-TLR4 cross-talk drives p-STAT3 (Ser727)-mediated mitochondrial oxidative stress and upregulates IDO/ICAM-1 in the steatohepatitis induced by aflatoxin B1 J Zhang, H Liu, Y Shen, D Cheng, H Tang, Q Zhang, C Li, M Liu, W Yao, ... Science of The Total Environment 923, 171377, 2024 | | 2024 |
| Landscape of Intrinsically Disordered Proteins in Mental Disorder Diseases X Zhang, Y Yang, G Hu, R Liu, N Zhou, X Song, SC Basu, M Jing, Q Hou Preprints, 2024 | | 2024 |
| MHCII-peptide presentation: an assessment of the state-of-the-art prediction methods Y Yang, F Pucci, M Rooman, F Xue, Q Hou Frontiers in Immunology 15, 1293706, 2024 | | 2024 |
| Function Prediction B Stringer, A Jacobsen, Q Hou, H de Ferrante, O Ivanova, K Waury, ... arXiv preprint arXiv:2307.02173, 2023 | | 2023 |
| Molecular Dynamics H Mouhib, JHM van Gils, J Gavaldá-Garciá, Q Hou, A May, AS Rauh, ... arXiv preprint arXiv:2307.02176, 2023 | | 2023 |
Anton FeenstraAssistant professor of Bioinformatics, IBIVU Centre for Integrative Bioinformatics, VU UniversityVerified email at vu.nl
