Conservation of complex knotting and slipknotting patterns in proteins JI Sulkowska, EJ Rawdon, KC Millet, JN Onuchic, A Stasiak Biophysical Journal 102 (3), 253a, 2012 | 270 | 2012 |
KnotProt: a database of proteins with knots and slipknots M Jamroz, W Niemyska, EJ Rawdon, A Stasiak, KC Millett, P Sułkowski, ... Nucleic acids research 43 (D1), D306-D314, 2015 | 215 | 2015 |
Thickness of knots RA Litherland, J Simon, O Durumeric, E Rawdon Topology and its Applications 91 (3), 233-244, 1999 | 179 | 1999 |
Effect of knotting on the shape of polymers EJ Rawdon, JC Kern, M Piatek, P Plunkett, A Stasiak, KC Millett Macromolecules 41 (21), 8281-8287, 2008 | 120 | 2008 |
KnotProt 2.0: a database of proteins with knots and other entangled structures P Dabrowski-Tumanski, P Rubach, D Goundaroulis, J Dorier, P Sułkowski, ... Nucleic acids research 47 (D1), D367-D375, 2019 | 99 | 2019 |
Identifying knots in proteins KC Millett, EJ Rawdon, A Stasiak, JI Sułkowska Biochemical Society Transactions 41 (2), 533-537, 2013 | 94 | 2013 |
Knot tightening by constrained gradient descent T Ashton, J Cantarella, M Piatek, EJ Rawdon Experimental Mathematics 20 (1), 57-90, 2011 | 81 | 2011 |
Bending modes of DNA directly addressed by cryo-electron microscopy of DNA minicircles D Demurtas, A Amzallag, EJ Rawdon, JH Maddocks, J Dubochet, ... Nucleic acids research 37 (9), 2882-2893, 2009 | 66 | 2009 |
Knotting pathways in proteins JI Sułkowska, JK Noel, CA Ramírez-Sarmiento, EJ Rawdon, KC Millett, ... Biochemical Society Transactions 41 (2), 523-527, 2013 | 53 | 2013 |
LinkProt: a database collecting information about biological links P Dabrowski-Tumanski, AI Jarmolinska, W Niemyska, EJ Rawdon, ... Nucleic acids research, gkw976, 2016 | 49 | 2016 |
Energy, ropelength, and other physical aspects of equilateral knots KC Millett, EJ Rawdon Journal of Computational Physics 186 (2), 426-456, 2003 | 45 | 2003 |
Can computers discover ideal knots? EJ Rawdon Experimental Mathematics 12 (3), 287-302, 2003 | 44 | 2003 |
Approximating the thickness of a knot EJ Rawdon Ideal knots, 143-150, 1998 | 44 | 1998 |
Approximating smooth thickness EJ Rawdon Journal of Knot Theory and Its Ramifications 9 (01), 113-145, 2000 | 42 | 2000 |
Scaling behavior and equilibrium lengths of knotted polymers E Rawdon, A Dobay, JC Kern, KC Millett, M Piatek, P Plunkett, A Stasiak Macromolecules 41 (12), 4444-4451, 2008 | 37 | 2008 |
How topoisomerase IV can efficiently unknot and decatenate negatively supercoiled DNA molecules without causing their torsional relaxation EJ Rawdon, J Dorier, D Racko, KC Millett, A Stasiak Nucleic acids research 44 (10), 4528-4538, 2016 | 36 | 2016 |
Total curvature and total torsion of knotted polymers P Plunkett, M Piatek, A Dobay, JC Kern, KC Millett, A Stasiak, EJ Rawdon Macromolecules 40 (10), 3860-3867, 2007 | 34 | 2007 |
Physical and numerical models in knot theory: including applications to the life sciences JA Calvo World Scientific, 2005 | 33 | 2005 |
Knot localization in proteins EJ Rawdon, KC Millett, JI Sułkowska, A Stasiak Biochemical Society Transactions 41 (2), 538-541, 2013 | 32 | 2013 |
Subknots in ideal knots, random knots and knotted proteins EJ Rawdon, KC Millett, A Stasiak Scientific reports 5 (1), 8928, 2015 | 30 | 2015 |