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Zhili He
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Year
Molecular ecological network analyses
Y Deng, YH Jiang, Y Yang, Z He, F Luo, J Zhou
BMC bioinformatics 13 (1), 1-20, 2012
11302012
GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes
Z He, TJ Gentry, CW Schadt, L Wu, J Liebich, SC Chong, Z Huang, W Wu, ...
The ISME journal 1 (1), 67-77, 2007
6602007
Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO2
J Zhou, Y Deng, F Luo, Z He, Y Yang
MBio 2 (4), e00122-11, 2011
5472011
Functional molecular ecological networks
J Zhou, Y Deng, F Luo, Z He, Q Tu, X Zhi
MBio 1 (4), e00169-10, 2010
4842010
The interconnected rhizosphere: high network complexity dominates rhizosphere assemblages
S Shi, EE Nuccio, ZJ Shi, Z He, J Zhou, MK Firestone
Ecology letters 19 (8), 926-936, 2016
4752016
Microbial mediation of carbon-cycle feedbacks to climate warming
J Zhou, K Xue, J Xie, YE Deng, L Wu, X Cheng, S Fei, S Deng, Z He, ...
Nature Climate Change 2 (2), 106-110, 2012
4552012
Stochasticity, succession, and environmental perturbations in a fluidic ecosystem
J Zhou, YE Deng, P Zhang, K Xue, Y Liang, JD Van Nostrand, Y Yang, ...
Proceedings of the National Academy of Sciences 111 (9), E836-E845, 2014
4392014
Reproducibility and quantitation of amplicon sequencing-based detection
J Zhou, L Wu, Y Deng, X Zhi, YH Jiang, Q Tu, J Xie, JD Van Nostrand, ...
The ISME journal 5 (8), 1303-1313, 2011
3912011
GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity
Z He, Y Deng, JD Van Nostrand, Q Tu, M Xu, CL Hemme, X Li, L Wu, ...
The ISME journal 4 (9), 1167-1179, 2010
3402010
Temperature mediates continental-scale diversity of microbes in forest soils
J Zhou, YE Deng, L Shen, C Wen, Q Yan, D Ning, Y Qin, K Xue, L Wu, ...
Nature communications 7 (1), 1-10, 2016
3322016
High-throughput metagenomic technologies for complex microbial community analysis: open and closed formats
J Zhou, Z He, Y Yang, Y Deng, SG Tringe, L Alvarez-Cohen
MBio 6 (1), e02288-14, 2015
3192015
Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community
CL Hemme, Y Deng, TJ Gentry, MW Fields, L Wu, S Barua, K Barry, ...
The ISME journal 4 (5), 660-672, 2010
3152010
Metagenomic analysis reveals a marked divergence in the structure of belowground microbial communities at elevated CO2
Z He, M Xu, Y Deng, S Kang, L Kellogg, L Wu, JD Van Nostrand, ...
Ecology Letters 13 (5), 564-575, 2010
2822010
Global diversity and biogeography of bacterial communities in wastewater treatment plants
L Wu, D Ning, B Zhang, Y Li, P Zhang, X Shan, Q Zhang, MR Brown, Z Li, ...
Nature microbiology 4 (7), 1183-1195, 2019
2802019
Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume
Z Lu, Y Deng, JD Van Nostrand, Z He, J Voordeckers, A Zhou, YJ Lee, ...
The ISME Journal 6 (2), 451-460, 2012
2742012
Microarray applications in microbial ecology research
TJ Gentry, GS Wickham, CW Schadt, Z He, J Zhou
Microbial ecology 52 (2), 159-175, 2006
2632006
Functional microarray analysis of nitrogen and carbon cycling genes across an Antarctic latitudinal transect
E Yergeau, S Kang, Z He, J Zhou, GA Kowalchuk
The ISME journal 1 (2), 163-179, 2007
2482007
The microbial gene diversity along an elevation gradient of the Tibetan grassland
Y Yang, Y Gao, S Wang, D Xu, H Yu, L Wu, Q Lin, Y Hu, X Li, Z He, ...
The ISME journal 8 (2), 430-440, 2014
2282014
Network succession reveals the importance of competition in response to emulsified vegetable oil amendment for uranium bioremediation
Y Deng, P Zhang, Y Qin, Q Tu, Y Yang, Z He, CW Schadt, J Zhou
Environmental Microbiology 18 (1), 205-218, 2016
2202016
Stochastic assembly leads to alternative communities with distinct functions in a bioreactor microbial community
J Zhou, W Liu, Y Deng, YH Jiang, K Xue, Z He, JD Van Nostrand, L Wu, ...
MBio 4 (2), e00584-12, 2013
2202013
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