| SMILE: mutual information learning for integration of single-cell omics data Y Xu, P Das, RP McCord Bioinformatics 38 (2), 476-486, 2022 | 27 | 2022 |
| Constricted migration is associated with stable 3D genome structure differences in cancer cells R Golloshi, C Playter, TF Freeman, P Das, TI Raines, JH Garretson, ... EMBO reports 23 (10), e52149, 2022 | 20 | 2022 |
| Chromosome compartmentalization alterations in prostate cancer cell lines model disease progression R San Martin, P Das, R Dos Reis Marques, Y Xu, JM Roberts, JT Sanders, ... Journal of Cell Biology 221 (2), e202104108, 2021 | 18 | 2021 |
| Loops, topologically associating domains, compartments, and territories are elastic and robust to dramatic nuclear volume swelling JT Sanders, R Golloshi, P Das, Y Xu, PH Terry, DG Nash, J Dekker, ... Scientific Reports 12 (1), 4721, 2022 | 16 | 2022 |
| Inferring chromosome radial organization from Hi-C data P Das, T Shen, RP McCord BMC bioinformatics 21, 1-28, 2020 | 9 | 2020 |
| Using contact statistics to characterize structure transformation of biopolymer ensembles P Das, R Golloshi, RP McCord, T Shen Physical Review E 101 (1), 2020 | 6 | 2020 |
| Transcriptional profiling of Hutchinson-Gilford Progeria syndrome fibroblasts reveals deficits in mesenchymal stem cell commitment to differentiation related to early events in … R San Martin, P Das, JT Sanders, AM Hill, RP McCord Elife 11, e81290, 2022 | 4 | 2022 |
| Constricted migration contributes to persistent 3D genome structure changes associated with an invasive phenotype in melanoma cells R Golloshi, RS Martin, P Das, TI Raines, D Thurston, T Freeman, ... BioRxiv, 856583, 2019 | 4 | 2019 |
| A novel SFLA based method for gene expression biclustering P Das, S Saha 2017 Third International Conference on Research in Computational …, 2017 | 4 | 2017 |
| Differential contributions of nuclear lamina association and genome compartmentalization to gene regulation P Das, R San Martin, RP McCord Nucleus 14 (1), 2197693, 2023 | 3 | 2023 |
| Characterizing the variation in chromosome structure ensembles in the context of the nuclear microenvironment P Das, T Shen, RP McCord PLoS Computational Biology 18 (8), e1010392, 2022 | 3 | 2022 |
| Alterations in chromosome spatial compartmentalization classify prostate cancer progression RS Martin, P Das, RDR Marques, Y Xu, RP McCord bioRxiv, 2021.04. 15.440056, 2021 | 3 | 2021 |
| Ranking of cancer mediating genes: a novel approach using genetic algorithm in DNA microarray gene expression dataset S Saha, P Das, A Ghosh, KN Dey Advances in Computing and Data Sciences: Second International Conference …, 2018 | 3 | 2018 |
| SnapShot: chromosome organization RP McCord, Y Xu, H Li, P Das, R San Martin Molecular Cell 82 (12), 2350-2350. e1, 2022 | 1 | 2022 |
| Quantifying variation in chromosome structural ensembles using statistical analysis of pairwise structure similarity matrices P Das, T Shen, RP McCord Biophysical Journal 121 (3), 475a, 2022 | 1 | 2022 |
| A novel clustering method to identify cell types from single cell transcriptional profiles P Das, KAA Nazeer Procedia computer science 132, 983-992, 2018 | 1 | 2018 |
| Chromosome compartmentalization: causes, changes, consequences, and conundrums H Li, C Playter, P Das, RP McCord Trends in Cell Biology, 2024 | | 2024 |
| Abstract A061: Nuclear lamin content as a biomarker for prostate cancer progression RS Martin, P Das, S Hossain, RP McCord Cancer Research 83 (11_Supplement), A061-A061, 2023 | | 2023 |
| Amorphous calcium phosphate-coated surfaces as a model for bone microenvironment in prostate cancer RS Martin, P Das, T Xue, MR Brown, RD Reis Marques, M Essington, ... bioRxiv, 2023.03. 20.533462, 2023 | | 2023 |
| Node Features of Chromosome Structure Network and Their Connections to Genome Annotation Y Xu, P Das, RP McCord, T Shen bioRxiv, 2023.12. 29.573476, 2023 | | 2023 |
Rachel Patton McCordAssistant Professor, University of TennesseeZweryfikowany adres z utk.edu
