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Nima Rafati
Nima Rafati
Bioinformatics Data Scientist, National Bioinformatics Infrastructure Sweden (NBIS), SciLife Lab
Zweryfikowany adres z nbis.se - Strona główna
Tytuł
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Cytowane przez
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Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication
M Carneiro, CJ Rubin, F Di Palma, FW Albert, J Alföldi, AM Barrio, ...
Science 345 (6200), 1074-1079, 2014
4122014
Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring
S Lamichhaney, AM Barrio, N Rafati, G Sundström, CJ Rubin, ER Gilbert, ...
Proceedings of the National Academy of Sciences 109 (47), 19345-19350, 2012
2922012
The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing
AMBSLGFNRMPHZJDDEMHPJMMBNXLWCXLCSYFKMXZCFUGCJRMSAMBMCAFLLNRSMYLXXL Andersson
eLife, 2016
180*2016
Parallel adaptive evolution of geographically distant herring populations on both sides of the North Atlantic Ocean
S Lamichhaney, AP Fuentes-Pardo, N Rafati, N Ryman, GR McCracken, ...
Proceedings of the National Academy of Sciences 114 (17), E3452-E3461, 2017
1242017
Identification of the Long-Sought Leptin in Chicken and Duck: Expression Pattern of the Highly GC-Rich Avian leptin Fits an Autocrine/Paracrine Rather Than …
E Seroussi, Y Cinnamon, S Yosefi, O Genin, JG Smith, N Rafati, ...
Endocrinology 157 (2), 737-751, 2016
1092016
Moderate nucleotide diversity in the Atlantic herring is associated with a low mutation rate
C Feng, M Pettersson, S Lamichhaney, CJ Rubin, N Rafati, M Casini, ...
Elife 6, e23907, 2017
722017
Changes in brain architecture are consistent with altered fear processing in domestic rabbits
I Brusini, M Carneiro, C Wang, CJ Rubin, H Ring, S Afonso, ...
Proceedings of the National Academy of Sciences 115 (28), 7380-7385, 2018
682018
Improved power and precision with whole genome sequencing data in genome-wide association studies of inflammatory biomarkers
J Höglund, N Rafati, M Rask-Andersen, S Enroth, T Karlsson, WE Ek, ...
Scientific reports 9 (1), 16844, 2019
622019
Amelanism in the corn snake is associated with the insertion of an LTR-retrotransposon in the OCA2 gene
SV Saenko, S Lamichhaney, AM Barrio, N Rafati, L Andersson, ...
Scientific reports 5 (1), 17118, 2015
452015
Reconstruction of the birth of a male sex chromosome present in Atlantic herring
N Rafati, J Chen, A Herpin, ME Pettersson, F Han, C Feng, O Wallerman, ...
Proceedings of the National Academy of Sciences 117 (39), 24359-24368, 2020
412020
Comparative omics and feeding manipulations in chicken indicate a shift of the endocrine role of visceral fat towards reproduction
S Bornelöv, E Seroussi, S Yosefi, S Benjamini, S Miyara, M Ruzal, ...
BMC genomics 19, 1-15, 2018
402018
Risk factors for abortion in dairy cows from commercial Holstein dairy herds in the Tehran region
N Rafati, H Mehrabani-Yeganeh, TE Hanson
Preventive veterinary medicine 96 (3-4), 170-178, 2010
382010
Large deletions at the SHOX locus in the pseudoautosomal region are associated with skeletal atavism in Shetland Ponies
N Rafati, LS Andersson, S Mikko, C Feng, T Raudsepp, J Pettersson, ...
G3: Genes, Genomes, Genetics 6 (7), 2213-2223, 2016
332016
A genomic map of clinal variation across the European rabbit hybrid zone
N Rafati, JA Blanco‐Aguiar, CJ Rubin, S Sayyab, SJ Sabatino, S Afonso, ...
Molecular ecology 27 (6), 1457-1478, 2018
322018
Whole-genome Sequencing of Follicular Thyroid Carcinomas Reveal Recurrent Mutations in MicroRNA Processing Subunit DGCR8
JO Paulsson, N Rafati, S DiLorenzo, Y Chen, F Haglund, J Zedenius, ...
The Journal of Clinical Endocrinology & Metabolism 106 (11), 3265-3282, 2021
232021
Brain transcriptomics of wild and domestic rabbits suggests that changes in dopamine signaling and ciliary function contributed to evolution of tameness
DX Sato, N Rafati, H Ring, S Younis, C Feng, JA Blanco-Aguiar, CJ Rubin, ...
Genome Biology and Evolution 12 (10), 1918-1928, 2020
212020
DNA metabarcoding for quality control of basil, oregano, and paprika
AC Raclariu-Manolică, JA Anmarkrud, M Kierczak, N Rafati, BLG Thorbek, ...
Frontiers in plant science 12, 665618, 2021
162021
Contribution of rare whole-genome sequencing variants to plasma protein levels and the missing heritability
M Kierczak, N Rafati, J Höglund, H Gourlé, V Lo Faro, D Schmitz, WE Ek, ...
Nature Communications 13 (1), 2532, 2022
122022
The dynamics of adaptation to stress from standing genetic variation and de novo mutations
SL Ament-Velásquez, C Gilchrist, A Rêgo, DP Bendixsen, C Brice, ...
Molecular biology and evolution 39 (11), msac242, 2022
102022
Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs
M Bianchi, N Rafati, Å Karlsson, E Murén, CJ Rubin, K Sundberg, ...
BMC genomics 21 (1), 1-16, 2020
102020
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