| Single-cell transcriptomic analysis of tissue-resident memory T cells in human lung cancer J Clarke, B Panwar, A Madrigal, D Singh, R Gujar, O Wood, SJ Chee, ... Journal of Experimental Medicine 216 (9), 2128-2149, 2019 | 225 | 2019 |
| Identification of significant chromatin contacts from HiChIP data by FitHiChIP S Bhattacharyya, V Chandra, P Vijayanand, F Ay Nature communications 10 (1), 4221, 2019 | 185 | 2019 |
| Identifying statistically significant chromatin contacts from Hi-C data with FitHiC2 A Kaul*, S Bhattacharyya*, F Ay Nature protocols 15 (3), 991-1012, 2020 | 177 | 2020 |
| Promoter-interacting expression quantitative trait loci are enriched for functional genetic variants V Chandra*, S Bhattacharyya*, BJ Schmiedel, A Madrigal, ... Nature Genetics 53 (1), 110-119, 2021 | 99 | 2021 |
| NSD2 overexpression drives clustered chromatin and transcriptional changes in a subset of insulated domains P Lhoumaud, S Badri, J Rodriguez-Hernaez, T Sakellaropoulos, G Sethia, ... Nature communications 10 (1), 4843, 2019 | 78 | 2019 |
| COVID-19 genetic risk variants are associated with expression of multiple genes in diverse immune cell types BJ Schmiedel*, J Rocha*, C Gonzalez-Colin*, S Bhattacharyya*, ... Nature Communications 12 (1), 1-12, 2021 | 62 | 2021 |
| Reduced expression of phosphatase PTPN2 promotes pathogenic conversion of Tregs in autoimmunity MND Svensson, KM Doody, BJ Schmiedel, S Bhattacharyya, B Panwar, ... The Journal of Clinical Investigation 129 (3), 1193-1210, 2019 | 60 | 2019 |
| Single-cell eQTL analysis of activated T cell subsets reveals activation and cell type–dependent effects of disease-risk variants BJ Schmiedel, C Gonzalez-Colin, V Fajardo, J Rocha, A Madrigal, ... Science immunology 7 (68), eabm2508, 2022 | 51 | 2022 |
| Detection of artifacts from high energy bursts in neonatal EEG S Bhattacharyya, A Biswas, J Mukherjee, AK Majumdar, B Majumdar, ... Computers in biology and medicine 43 (11), 1804-1814, 2013 | 34 | 2013 |
| Feature selection for automatic burst detection in neonatal electroencephalogram S Bhattacharyya, A Biswas, J Mukherjee, AK Majumdar, B Majumdar, ... IEEE Journal on Emerging and selected topics in Circuits And Systems 1 (4 …, 2011 | 28 | 2011 |
| Lineage-specific 3D genome organization is assembled at multiple scales by IKAROS Y Hu, DS Figueroa, Z Zhang, M Veselits, S Bhattacharyya, M Kashiwagi, ... Cell 186 (24), 5269-5289. e22, 2023 | 23 | 2023 |
| Automated detection of newborn sleep apnea using video monitoring system S Sharma, S Bhattacharyya, J Mukherjee, PK Purkait, A Biswas, AK Deb 2015 Eighth International Conference on Advances in Pattern Recognition …, 2015 | 15 | 2015 |
| FitHiChIP: Identification of significant chromatin contacts from HiChIP data S Bhattacharyya, V Chandra, P Vijayanand, F Ay biorxiv 412833 (https://doi.org/10.1101/412833), 2018 | 9 | 2018 |
| Summarization of neonatal video EEG for seizure and artifact detection S Bhattacharyya, A Roy, DP Dogra, A Biswas, J Mukherjee, AK Majumdar, ... 2011 Third National Conference on Computer Vision, Pattern Recognition …, 2011 | 9 | 2011 |
| A web enabled health information system for the neonatal intensive care unit (nicu) S Ray, D Dogra, S Bhattacharya, B Saha, A Biswas, A Majumdar, ... 2011 IEEE World Congress on Services, 451-458, 2011 | 6 | 2011 |
| Automated Burst Detection in Neonatal EEG S Bhattacharyya, J Mukhopadhyay, AK Majumdar, B Majumdar, AK Singh, ... International Conference on Bio-inspired System and Signal Processing …, 2011 | 5 | 2011 |
| COSPEDTree: COuplet Supertree by Equivalence Partitioning of taxa set and DAG formation S Bhattacharyya, J Mukherjee IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (3 …, 2014 | 3 | 2014 |
| Automatic sleep spindle detection in raw EEG signal of newborn babies S Bhattacharyya, S Ghoshal, A Biswas, J Mukhopadhyay, AK Majumdar, ... 2011 3rd International Conference on Electronics Computer Technology 1, 73-77, 2011 | 3 | 2011 |
| Android application for therapeutic feed and fluid calculation in neonatal care-a way to fast, accurate and safe health-care delivery A Biswas, R Roy, S Bhattacharyya, D Khaneja, SD Bhattacharya, ... 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2016 | 2 | 2016 |
| Couplet supertree by equivalence partitioning of taxa set and dag formation S Bhattacharyya, J Mukhopadhyay Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014 | 2 | 2014 |
Ferhat AyAssociate Professor, La Jolla Institute for ImmunologyVerified email at lji.org
