| Dissociation of eIF1 from the 40S ribosomal subunit is a key step in start codon selection in vivo YN Cheung, D Maag, SF Mitchell, CA Fekete, MA Algire, JE Takacs, ... Genes & development 21 (10), 1217-1230, 2007 | 207 | 2007 |
| Dynamics of ribosome scanning and recycling revealed by translation complex profiling SK Archer, NE Shirokikh, TH Beilharz, T Preiss Nature 535 (7613), 570-574, 2016 | 203 | 2016 |
| Translation initiation by factor-independent binding of eukaryotic ribosomes to internal ribosomal entry sites AV Pisarev, NE Shirokikh, CUT Hellen Comptes rendus biologies 328 (7), 589-605, 2005 | 163 | 2005 |
| Translation initiation by cap‐dependent ribosome recruitment: Recent insights and open questions NE Shirokikh, T Preiss Wiley Interdisciplinary Reviews: RNA 9 (4), e1473, 2018 | 149 | 2018 |
| The fidelity of translation initiation: reciprocal activities of eIF1, IF3 and YciH IB Lomakin, NE Shirokikh, MM Yusupov, CUT Hellen, TV Pestova The EMBO journal 25 (1), 196-210, 2006 | 126 | 2006 |
| Insights into the biogenesis and potential functions of exonic circular RNA C Ragan, GJ Goodall, NE Shirokikh, T Preiss Scientific reports 9 (1), 2048, 2019 | 117 | 2019 |
| The eIF1A C‐terminal domain promotes initiation complex assembly, scanning and AUG selection in vivo CA Fekete, DJ Applefield, SA Blakely, N Shirokikh, T Pestova, JR Lorsch, ... The EMBO journal 24 (20), 3588-3601, 2005 | 115 | 2005 |
| Selective translation complex profiling reveals staged initiation and co-translational assembly of initiation factor complexes S Wagner, A Herrmannová, V Hronová, S Gunišová, ND Sen, RD Hannan, ... Molecular cell 79 (4), 546-560. e7, 2020 | 98 | 2020 |
| Poly (A) leader of eukaryotic mRNA bypasses the dependence of translation on initiation factors NE Shirokikh, AS Spirin Proceedings of the National Academy of Sciences 105 (31), 10738-10743, 2008 | 97 | 2008 |
| Probing the closed-loop model of mRNA translation in living cells SK Archer, NE Shirokikh, CV Hallwirth, TH Beilharz, T Preiss RNA biology 12 (3), 248-254, 2015 | 74 | 2015 |
| Translation complex profile sequencing to study the in vivo dynamics of mRNA–ribosome interactions during translation initiation, elongation and termination NE Shirokikh, SK Archer, TH Beilharz, D Powell, T Preiss Nature protocols 12 (4), 697-731, 2017 | 51 | 2017 |
| Quantitative analysis of ribosome–mRNA complexes at different translation stages NE Shirokikh, EZ Alkalaeva, KS Vassilenko, ZA Afonina, OM Alekhina, ... Nucleic acids research 38 (3), e15-e15, 2010 | 41 | 2010 |
| Selective and flexible depletion of problematic sequences from RNA-seq libraries at the cDNA stage SK Archer, NE Shirokikh, T Preiss BMC genomics 15, 1-9, 2014 | 36 | 2014 |
| Control of translation at the initiation phase during glucose starvation in yeast Y Janapala, T Preiss, NE Shirokikh International Journal of Molecular Sciences 20 (16), 4043, 2019 | 28 | 2019 |
| Insight into the structural organization of the omega leader of TMV RNA: the role of various regions of the sequence in the formation of a compact structure of the omega RNA SC Agalarov, EA Sogorin, NE Shirokikh, AS Spirin Biochemical and biophysical research communications 404 (1), 250-253, 2011 | 26 | 2011 |
| Chemical and enzymatic probing of spatial structure of the omega leader of tobacco mosaic virus RNA NE Shirokikh, SC Agalarov, AS Spirin Biochemistry (Moscow) 75, 405-411, 2010 | 19 | 2010 |
| The leader sequence of tobacco mosaic virus RNA devoid of Watson–Crick secondary structure possesses a cooperatively melted, compact conformation AA Kovtun, NE Shirokikh, AT Gudkov, AS Spirin Biochemical and biophysical research communications 358 (1), 368-372, 2007 | 19 | 2007 |
| Migration of small ribosomal subunits on the 5′ untranslated regions of capped messenger RNA NE Shirokikh, YS Dutikova, MA Staroverova, RD Hannan, T Preiss International Journal of Molecular Sciences 20 (18), 4464, 2019 | 17 | 2019 |
| Probe‐directed degradation (PDD) for flexible removal of unwanted cDNA sequences from RNA‐Seq libraries SK Archer, NE Shirokikh, T Preiss Current protocols in human genetics 85 (1), 11.15. 1-11.15. 36, 2015 | 17 | 2015 |
| Simultaneous identification of m6A and m5C reveals coordinated RNA modification at single-molecule resolution PA Mateos, AJ Sethi, A Ravindran, A Srivastava, M Kanchi, S Mahmud, ... BioRxiv, 2022.03. 14.484124, 2022 | 16 | 2022 |
