| Self-driven jamming in growing microbial populations M Delarue, J Hartung, C Schreck, P Gniewek, L Hu, S Herminghaus, ... Nature Physics, 2016 | 85 | 2016 |
| Multibody coarse‐grained potentials for native structure recognition and quality assessment of protein models P Gniewek, SP Leelananda, A Kolinski, RL Jernigan, A Kloczkowski Proteins: Structure, Function, and Bioinformatics 79 (6), 1923-1929, 2011 | 46 | 2011 |
| Coarse-grained modeling of mucus barrier properties P Gniewek, A Kolinski Biophysical journal 102 (2), 195-200, 2012 | 25 | 2012 |
| Free energies for coarse-grained proteins by integrating multibody statistical contact potentials with entropies from elastic network models MT Zimmermann, SP Leelananda, P Gniewek, Y Feng, RL Jernigan, ... Journal of structural and functional genomics 12 (2), 137-147, 2011 | 21 | 2011 |
| Elastic network normal modes provide a basis for protein structure refinement P Gniewek, A Kolinski, RL Jernigan, A Kloczkowski The Journal of chemical physics 136 (19), 05B616, 2012 | 19 | 2012 |
| BioShell-Threading: versatile Monte Carlo package for protein 3D threading P Gniewek, A Kolinski, A Kloczkowski, D Gront BMC bioinformatics 15 (1), 1-8, 2014 | 18 | 2014 |
| Statistical contact potentials in protein coarse-grained modeling: from pair to multi-body potentials SP Leelananda, Y Feng, P Gniewek, A Kloczkowski, RL Jernigan Multiscale Approaches to Protein Modeling, 127-157, 2011 | 11 | 2011 |
| Coarse-grained Monte Carlo simulations of mucus: structure, dynamics, and thermodynamics P Gniewek, A Kolinski Biophysical journal 99 (11), 3507-3516, 2010 | 9 | 2010 |
| How noise in force fields can affect the structural refinement of protein models? P Gniewek, A Kolinski, RL Jernigan, A Kloczkowski Proteins: Structure, Function, and Bioinformatics 80 (2), 335-341, 2012 | 8 | 2012 |
| Optimization of profile-to-profile alignment parameters for one-dimensional threading P Gniewek, A Kolinski, D Gront Journal of Computational Biology 19 (7), 879-886, 2012 | 5 | 2012 |
| Immunological implications of a structural analysis of two different porcine IL1β proteins expressed in macrophages and embryos AR Katebi, P Gniewek, M Zimmermann, S Saraswathi, Z Gong, CK Tuggle, ... Proceedings of the First ACM International Conference on Bioinformatics and …, 2010 | 5 | 2010 |
| Note: A simple picture of subdiffusive polymer motion from stochastic simulations P Gniewek, A Kolinski The Journal of chemical physics 134 (5), 056101, 2011 | 4 | 2011 |
| Fluid flow through packings of elastic shells P Gniewek, O Hallatschek Physical Review E 99 (2), 023103, 2019 | 3 | 2019 |
| Biomechanical feedback strengthens jammed cellular packings P Gniewek, CF Schreck, O Hallatschek Physical Review Letters 122 (20), 208102, 2019 | 3* | 2019 |
| Mechanics of Confined Microbial Populations P Gniewek UC Berkeley, 2018 | 1 | 2018 |
| Designing an Automatic Pipeline for Protein Structure Prediction S Kmiecik, M Jamroz, A Zwolinska, P Gniewek, A Kolinski From Computational Biophysics to Systems Biology (CBSB08) 40, 105-108, 2008 | 1 | 2008 |
| Instance Segmentation of Densely Packed Cells Using a Hybrid Model of U-Net and Mask R-CNN T Konopczyński, R Heiman, P Wo¼nicki, P Gniewek, MC Duvernoy, ... International Conference on Artificial Intelligence and Soft Computing, 626-635, 2020 | | 2020 |
Andrzej KolinskiProfessor, University of WarsawVerified email at chem.uw.edu.pl
