EMPIAR: the electron microscopy public image archive A Iudin, PK Korir, S Somasundharam, S Weyand, C Cattavitello, ... Nucleic Acids Research 51 (D1), D1503-D1511, 2023 | 68 | 2023 |
Sequence, structure and function relationships in flaviviruses as assessed by evolutive aspects of its conserved non-structural protein domains NJ da Fonseca Jr, MQL Afonso, NG Pedersolli, LC de Oliveira, ... Biochemical and biophysical research communications 492 (4), 565-571, 2017 | 30 | 2017 |
Dense optical flow software to quantify cellular contractility S Scalzo, MQL Afonso, NJ da Fonseca, ICG Jesus, AP Alves, ... Cell Reports Methods 1 (4), 2021 | 18 | 2021 |
Coevolved positions represent key functional properties in the trypsin-like serine proteases protein family M Querino Lima Afonso, NJ da Fonseca Jr, LC de Oliveira, FP Lobo, ... Journal of chemical information and modeling 60 (2), 1060-1068, 2020 | 10 | 2020 |
PFstats: a network-based open tool for protein family analysis NJ Fonseca-Junior, MQL Afonso, LC Oliveira, L Bleicher Journal of Computational Biology 25 (5), 480-486, 2018 | 9 | 2018 |
A new method bridging graph theory and residue co-evolutionary networks for specificity determinant positions detection NJ da Fonseca Jr, MQL Afonso, LC de Oliveira, L Bleicher Bioinformatics 35 (9), 1478-1485, 2019 | 8 | 2019 |
EMDB—the Electron Microscopy Data Bank PDB Consortium Nucleic Acids Research, 2023 | 6* | 2023 |
CONAN: a web application to detect specificity determinants and functional sites by amino acids co-variation network analysis NJ Fonseca, MQL Afonso, L Carrijo, L Bleicher Bioinformatics 37 (7), 1026-1028, 2021 | 6 | 2021 |
League of Brazilian Bioinformatics: a competition framework to promote scientific training LM Carvalho, NAR Coimbra, MRC Neves, NJ Fonseca, MA Costa, ... bioRxiv, 2020.12. 17.423357, 2020 | 2 | 2020 |
Correction to ‘EMDB—the Electron Microscopy Data Bank’ J Turner, S Abbott, N Fonseca, R Pye, L Carrijo, AK Duraisamy, O Salih, ... Nucleic Acids Research 52, D1701, 2024 | | 2024 |
EMDB-The Electron Microscopy Data Bank J Turner, wwPDB Consortium bioRxiv, 2023.10. 03.560672, 2023 | | 2023 |
Naview: A d3. js Based JavaScript Library for Drawing and Annotating Voltage-Gated Sodium Channels Membrane Diagrams MQL Afonso, NJ da Fonseca Júnior, TG Miranda, L Bleicher Frontiers in Bioinformatics 2, 774417, 2022 | | 2022 |
CEvADA: Co-Evolution Analysis Data Archive NJ da Fonseca Júnior, MQL Afonso, L Bleicher Advances in Bioinformatics and Computational Biology: 14th Brazilian …, 2021 | | 2021 |
PFstats User guide (Shell Version) L Bleicher, N Fonseca | | 2017 |
PFSTATS: Sistema para Estudo de Famílias de Proteínas através de Detecção de Resíduos Conservados e Decomposição de Redes de Coevolução N Fonseca, L Bleicher Programa de Pós-Graduação em Bioinformática, 116, 2016 | | 2016 |
Modelagem e decomposição de redes de coevolução de aminoácidos: Aplicações na determinação de especificidade e anotação de proteínas N Fonseca Jr, L Carrijo, M Querino | | |