An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 11621 | 2012 |
Landscape of transcription in human cells S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ... Nature 489 (7414), 101-108, 2012 | 3958 | 2012 |
The draft genome of sweet orange (Citrus sinensis) Q Xu, LL Chen, X Ruan, D Chen, A Zhu, C Chen, D Bertrand, WB Jiao, ... Nature genetics 45 (1), 59-66, 2013 | 736 | 2013 |
CTCF-mediated human 3D genome architecture reveals chromatin topology for transcription Z Tang, OJ Luo, X Li, M Zheng, JJ Zhu, P Szalaj, P Trzaskoma, ... Cell 163 (7), 1611-1627, 2015 | 642 | 2015 |
Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ... PLoS Genet 6 (2), e1000841, 2010 | 394 | 2010 |
The 4D nucleome project J Dekker, AS Belmont, M Guttman, VO Leshyk, JT Lis, S Lomvardas, ... Nature 549 (7671), 219-226, 2017 | 303 | 2017 |
Transcriptional profiles of bovine in vivo pre-implantation development Z Jiang, J Sun, H Dong, O Luo, X Zheng, C Obergfell, Y Tang, J Bi, ... BMC genomics 15 (1), 1-15, 2014 | 103 | 2014 |
Refined mapping of autoimmune disease associated genetic variants with gene expression suggests an important role for non-coding RNAs I Ricaño-Ponce, DV Zhernakova, P Deelen, O Luo, X Li, A Isaacs, ... Journal of autoimmunity 68, 62-74, 2016 | 47 | 2016 |
Long-read ChIA-PET for base-pair-resolution mapping of haplotype-specific chromatin interactions X Li, OJ Luo, P Wang, M Zheng, D Wang, E Piecuch, JJ Zhu, SZ Tian, ... Nature protocols 12 (5), 899-915, 2017 | 45 | 2017 |
An integrated 3-dimensional genome modeling engine for data-driven simulation of spatial genome organization P Sza³aj, Z Tang, P Michalski, MJ Pietal, OJ Luo, M Sadowski, X Li, ... Genome research 26 (12), 1697-1709, 2016 | 31 | 2016 |
Intra-and inter-individual genetic differences in gene expression MJ Cowley, CJ Cotsapas, RBH Williams, EKF Chan, JN Pulvers, MY Liu, ... Mammalian Genome 20 (5), 281-295, 2009 | 25 | 2009 |
Multiomic profiling identifies cis-regulatory networks underlying human pancreatic β cell identity and function N Lawlor, EJ Márquez, P Orchard, N Narisu, MS Shamim, A Thibodeau, ... Cell reports 26 (3), 788-801. e6, 2019 | 16 | 2019 |
A comparative location database (CompLDB): map integration within and between species W Liao, A Collins, M Hobbs, MS Khatkar, J Luo, FW Nicholas Mammalian Genome 18 (5), 287-299, 2007 | 15 | 2007 |
QuIN: a web server for querying and visualizing chromatin interaction networks A Thibodeau, EJ Márquez, O Luo, Y Ruan, F Menghi, DG Shin, ML Stitzel, ... PLoS computational biology 12 (6), e1004809, 2016 | 7 | 2016 |
Complexity, post-genomic biology and gene expression programs RBH Williams, OJ Luo Complex Physical, Biophysical And Econophysical Systems, 319-350, 2010 | 4 | 2010 |
Identification and validation of predictive factors for progression to severe COVID-19 pneumonia by proteomics B Di, H Jia, OJ Luo, F Lin, K Li, Y Zhang, H Wang, H Liang, J Fan, Z Yang Signal transduction and targeted therapy 5 (1), 1-4, 2020 | 3 | 2020 |
VariantSpark, a random forest machine learning implementation for ultra high dimensional data A Bayat, P Szul, AR O’Brien, R Dunne, OJ Luo, Y Jain, B Hosking, ... bioRxiv, 702902, 2019 | 1 | 2019 |
CD8+ T cell epitope variations suggest a potential antigen presentation deficiency for spike protein of SARS-CoV-2 C Qiu, C Xiao, Z Wang, G Zhu, X Chen, L Gao, J Den, J Su, H Su, EF Fang, ... bioRxiv, 2021 | | 2021 |
VariantSpark: Cloud-based machine learning for association study of complex phenotype and large-scale genomic data A Bayat, P Szul, AR O’Brien, R Dunne, B Hosking, Y Jain, C Hosking, ... GigaScience 9 (8), giaa077, 2020 | | 2020 |
Macrophage mediated recognition and clearance of Borrelia burgdorferinelicits MyD88-dependent and-independent phagosomal signals that contribute to phagocytosis and inflammation SJ Benjamin, KL Hawley, P Vera-Licona, CJ La Vake, JL Cervantes, ... BioRxiv, 593566, 2019 | | 2019 |