Cotranslational Protein Folding inside the Ribosome Exit Tunnel OB Nilsson, R Hedman, J Marino, S Wickles, L Bischoff, ... Cell reports 12 (10), 1533-1540, 2015 | 279 | 2015 |
Diffusion within the cytoplasm: a mesoscale model of interacting macromolecules F Trovato, V Tozzini Biophysical Journal 107 (11), 2579-91, 2014 | 92 | 2014 |
Domain topology, stability, and translation speed determine mechanical force generation on the ribosome SE Leininger, F Trovato, DA Nissley, EP O’Brien Proceedings of the National Academy of Sciences 116 (12), 5523-5532, 2019 | 51 | 2019 |
Insights into cotranslational nascent protein behavior from computer simulations F Trovato, EP O'Brien Annual review of biophysics 45, 345-369, 2016 | 45 | 2016 |
Supercoiling and local denaturation of plasmids with a minimalist DNA model F Trovato, V Tozzini The journal of physical chemistry B 112 (42), 13197-13200, 2008 | 45 | 2008 |
Homeotic proteins participate in the function of human-DNA replication origins L Marchetti, L Comelli, B D’Innocenzo, L Puzzi, S Luin, D Arosio, ... Nucleic acids research 38 (22), 8105-8119, 2010 | 37 | 2010 |
Electrostatic interactions govern extreme nascent protein ejection times from ribosomes and can delay ribosome recycling DA Nissley, QV Vu, F Trovato, N Ahmed, Y Jiang, MS Li, EP O’Brien Journal of the American Chemical Society 142 (13), 6103-6110, 2020 | 36 | 2020 |
Evolutionary algorithm in the optimization of a coarse-grained force field F Leonarski, F Trovato, V Tozzini, A Les, J Trylska Journal of Chemical Theory and Computation 9 (11), 4874-4889, 2013 | 30 | 2013 |
Universal protein misfolding intermediates can bypass the proteostasis network and remain soluble and less functional DA Nissley, Y Jiang, F Trovato, I Sitarik, KB Narayan, P To, Y Xia, ... Nature communications 13 (1), 3081, 2022 | 29 | 2022 |
Fast Protein Translation Can Promote Co- and Posttranslational Folding of Misfolding-Prone Proteins F Trovato, EP O'Brien Biophysical Journal 112, 1807-1819, 2017 | 25 | 2017 |
Molecular simulations of cellular processes F Trovato, G Fumagalli Biophysical Reviews 9 (6), 941, 2017 | 20 | 2017 |
A minimalist model of protein diffusion and interactions: the green fluorescent protein within the cytoplasm F Trovato, R Nifosì, A Di Fenza, V Tozzini Macromolecules 46 (20), 8311-8322, 2013 | 20 | 2013 |
Minimalist models for biopolymers: Open problems, latest advances and perspectives F Trovato, V Tozzini AIP Conference Proceedings 1456 (1), 187-200, 2012 | 19 | 2012 |
Outcomes of Vascular Access Care and Surgery Managed by Interventional Nephrologists: A Twelve-Year Experience. PV Fumagalli G, De Pietro S, Migliori M, Ferrandello FP, Trovato F, Donadio C Blood Purif. 42, 111, 2016 | 10 | 2016 |
The forearm arteriovenous graft between the brachial artery and the brachial vein as a reliable dialysis vascular access for patients with inadequate superficial veins G Fumagalli, F Trovato, M Migliori, V Panichi, S De Pietro Journal of Vascular Surgery 70 (1), 199-207. e4, 2019 | 8 | 2019 |
Genetic algorithm optimization of force field parameters: application to a coarse-grained model of RNA F Leonarski, F Trovato, V Tozzini, J Trylska European Conference on Evolutionary Computation, Machine Learning and Data …, 2011 | 7 | 2011 |
Cotranslational protein folding inside the ribosome exit tunnel. Cell Rep 12: 1533–1540 OB Nilsson, R Hedman, J Marino, S Wickles, L Bischoff, M Johansson, ... | 6 | 2015 |
Combining Simulations, Theory, and Experiments into Multiscale Models of Biological Events F Trovato, J Trylska, PJ Bond, PG Wolynes Frontiers in Molecular Biosciences 8, 797754, 2021 | 1 | 2021 |
Modello minimalista per Acidi Nucleici: studio delle proprietà e delle transizioni strutturali del DNA tramite dinamica molecolare F Trovato, DV Tozzini M. Sc. thesis, Università di Pisa, Italy, 2007 | 1 | 2007 |
Across the E. Coli Proteome it is Common for Proteins to Become Kinetically Trapped in Soluble, Near-Native, Non-Functional Conformations that Bypass the Proteostasis Network DA Nissley, F Trovato, IM Sitarik, Y Jiang, K Narayan, EP O’Brien Biophysical Journal 120 (3), 117a-118a, 2021 | | 2021 |