| Intragenic DNA methylation prevents spurious transcription initiation F Neri, S Rapelli, A Krepelova, D Incarnato, C Parlato, G Basile, ... Nature 543 (7643), 72-77, 2017 | 694 | 2017 |
| AKI recovery induced by mesenchymal stromal cell-derived extracellular vesicles carrying microRNAs F Collino, S Bruno, D Incarnato, D Dettori, F Neri, P Provero, M Pomatto, ... Journal of the American Society of Nephrology 26 (10), 2349-2360, 2015 | 247 | 2015 |
| Modulation of circRNA metabolism by m6A modification G Di Timoteo, D Dattilo, A Centron-Broco, A Colantoni, M Guarnacci, ... Cell reports 31 (6), 2020 | 240 | 2020 |
| Multiplexed genome engineering by Cas12a and CRISPR arrays encoded on single transcripts CC Campa, NR Weisbach, AJ Santinha, D Incarnato, RJ Platt Nature Methods 16 (9), 887-893, 2019 | 212 | 2019 |
| Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements I Manfredonia, C Nithin, A Ponce-Salvatierra, P Ghosh, TK Wirecki, ... Nucleic acids research 48 (22), 12436-12452, 2020 | 202 | 2020 |
| TET1 is a tumour suppressor that inhibits colon cancer growth by derepressing inhibitors of the WNT pathway F Neri, D Dettori, D Incarnato, A Krepelova, S Rapelli, M Maldotti, ... Oncogene 34 (32), 4168-4176, 2015 | 201 | 2015 |
| Dnmt3L antagonizes DNA methylation at bivalent promoters and favors DNA methylation at gene bodies in ESCs F Neri, A Krepelova, D Incarnato, M Maldotti, C Parlato, F Galvagni, ... Cell 155 (1), 121-134, 2013 | 201 | 2013 |
| Genome-wide analysis identifies a functional association of Tet1 and Polycomb repressive complex 2 in mouse embryonic stem cells F Neri, D Incarnato, A Krepelova, S Rapelli, A Pagnani, R Zecchina, ... Genome biology 14, 1-13, 2013 | 193 | 2013 |
| Genome-wide profiling of mouse RNA secondary structures reveals key features of the mammalian transcriptome D Incarnato, F Neri, F Anselmi, S Oliviero Genome biology 15, 1-13, 2014 | 149 | 2014 |
| Single-base resolution analysis of 5-formyl and 5-carboxyl cytosine reveals promoter DNA methylation dynamics F Neri, D Incarnato, A Krepelova, S Rapelli, F Anselmi, C Parlato, ... Cell reports 10 (5), 674-683, 2015 | 139 | 2015 |
| High-throughput single-base resolution mapping of RNA 2΄-O-methylated residues D Incarnato, F Anselmi, E Morandi, F Neri, M Maldotti, S Rapelli, C Parlato, ... Nucleic acids research 45 (3), 1433-1441, 2017 | 126 | 2017 |
| Genome-scale deconvolution of RNA structure ensembles E Morandi, I Manfredonia, LM Simon, F Anselmi, MJ van Hemert, ... Nature methods 18 (3), 249-252, 2021 | 77 | 2021 |
| Mutations in NOTCH1 PEST domain orchestrate CCL19-driven homing of chronic lymphocytic leukemia cells by modulating the tumor suppressor gene DUSP22 F Arruga, B Gizdic, C Bologna, S Cignetto, R Buonincontri, S Serra, ... Leukemia 31 (9), 1882-1893, 2017 | 66 | 2017 |
| RNA Framework: an all-in-one toolkit for the analysis of RNA structures and post-transcriptional modifications D Incarnato, E Morandi, LM Simon, S Oliviero Nucleic acids research 46 (16), e97-e97, 2018 | 65 | 2018 |
| In vivo analysis of influenza A mRNA secondary structures identifies critical regulatory motifs LM Simon, E Morandi, A Luganini, G Gribaudo, L Martinez-Sobrido, ... Nucleic acids research 47 (13), 7003-7017, 2019 | 60 | 2019 |
| Extracellular nicotinate phosphoribosyltransferase binds Toll like receptor 4 and mediates inflammation A Managò, V Audrito, F Mazzola, L Sorci, F Gaudino, K Gizzi, N Vitale, ... Nature Communications 10 (1), 4116, 2019 | 56 | 2019 |
| Adaptive phenotypic response to climate enabled by epigenetics in a K-strategy species, the fish Leucoraja ocellata (Rajidae) J Lighten, D Incarnato, BJ Ward, C van Oosterhout, I Bradbury, M Hanson, ... Royal Society Open Science 3 (10), 160299, 2016 | 54 | 2016 |
| FOSL1 controls the assembly of endothelial cells into capillary tubes by direct repression of αv and β3 integrin transcription S Evellin, F Galvagni, A Zippo, F Neri, M Orlandini, D Incarnato, D Dettori, ... Molecular and cellular biology 33 (6), 1198-1209, 2013 | 54 | 2013 |
| Probing the dynamic RNA structurome and its functions RC Spitale, D Incarnato Nature Reviews Genetics 24 (3), 178-196, 2023 | 53 | 2023 |
| A novel SHAPE reagent enables the analysis of RNA structure in living cells with unprecedented accuracy T Marinus, AB Fessler, CA Ogle, D Incarnato Nucleic acids research 49 (6), e34-e34, 2021 | 53 | 2021 |
