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Aashish Adhikari
Aashish Adhikari
Zweryfikowany adres z berkeley.edu
Tytuł
Cytowane przez
Cytowane przez
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The role of exome sequencing in newborn screening for inborn errors of metabolism
AN Adhikari, RC Gallagher, Y Wang, RJ Currier, G Amatuni, ...
Nature medicine 26 (9), 1392-1397, 2020
1592020
Multisystem Anomalies in Severe Combined Immunodeficiency with Mutant BCL11B
D Punwani, Y Zhang, J Yu, MJ Cowan, S Rana, A Kwan, AN Adhikari, ...
New England Journal of Medicine 375 (22), 2165-2176, 2016
1172016
The use of whole genome and exome sequencing for newborn screening: challenges and opportunities for population health
AC Woerner, RC Gallagher, J Vockley, AN Adhikari
Frontiers in Pediatrics 9, 663752, 2021
642021
Heterogeneous dynamics and dynamic heterogeneities at the glass transition probed with single molecule spectroscopy
AN Adhikari, NA Capurso, D Bingemann
The Journal of chemical physics 127 (11), 2007
552007
De novo prediction of protein folding pathways and structure using the principle of sequential stabilization
AN Adhikari, KF Freed, TR Sosnick
Proceedings of the National Academy of Sciences 109 (43), 17442-17447, 2012
502012
Opportunities and challenges for the computational interpretation of rare variation in clinically important genes
G McInnes, AG Sharo, ML Koleske, JEH Brown, M Norstad, AN Adhikari, ...
The American Journal of Human Genetics 108 (4), 535-548, 2021
472021
The landscape of tolerated genetic variation in humans and primates
H Gao, T Hamp, J Ede, JG Schraiber, J McRae, M Singer-Berk, Y Yang, ...
Science 380 (6648), eabn8153, 2023
452023
Integration of Multiple Epigenomic Marks Improves Prediction of Variant Impact in Saturation Mutagenesis Reporter Assay
D Shigaki, O Adato, AN Adhikari, S Dong, A Hawkins‐Hooker, F Inoue, ...
Human mutation, 2019
442019
Modeling large regions in proteins: Applications to loops, termini, and folding
AN Adhikari, J Peng, M Wilde, J Xu, KF Freed, TR Sosnick
Protein Science 21 (1), 107-121, 2012
362012
Simplified protein models: Predicting folding pathways and structure using amino acid sequences
AN Adhikari, KF Freed, TR Sosnick
Physical review letters 111 (2), 028103, 2013
352013
VIPdb, a genetic variant impact predictor database
Z Hu, C Yu, M Furutsuki, G Andreoletti, M Ly, R Hoskins, AN Adhikari, ...
Human mutation 40 (9), 1202-1214, 2019
312019
The folding transition state of protein L is extensive with nonnative interactions (and not small and polarized)
TY Yoo, A Adhikari, Z Xia, T Huynh, KF Freed, R Zhou, TR Sosnick
Journal of molecular biology 420 (3), 220-234, 2012
302012
Even with nonnative interactions, the updated folding transition states of the homologs Proteins G & L are extensive and similar
MC Baxa, W Yu, AN Adhikari, L Ge, Z Xia, R Zhou, KF Freed, TR Sosnick
Proceedings of the National Academy of Sciences 112 (27), 8302-8307, 2015
242015
Genomic analysis of historical cases with positive newborn screens for short-chain acyl-CoA dehydrogenase deficiency shows that a validated second-tier biochemical test can …
AN Adhikari, RJ Currier, H Tang, CT Turgeon, RL Nussbaum, ...
International journal of neonatal screening 6 (2), 41, 2020
122020
CAGI SickKids challenges: Assessment of phenotype and variant predictions derived from clinical and genomic data of children with undiagnosed diseases
L Kasak, JM Hunter, R Udani, C Bakolitsa, Z Hu, AN Adhikari, G Babbi, ...
Human Mutation 40 (9), 1373-1391, 2019
112019
Gene‐specific features enhance interpretation of mutational impact on acid α‐glucosidase enzyme activity
AN Adhikari
Human mutation 40 (9), 1507-1518, 2019
102019
Lessons from the CAGI‐4 Hopkins clinical panel challenge
JM Chandonia, AN Adhikari, M Carraro, A Chhibber, GR Cutting, Y Fu, ...
Human mutation 38 (9), 1155-1168, 2017
92017
ClinVar and HGMD genomic variant classification accuracy has improved over time, as measured by implied disease burden
AG Sharo, Y Zou, AN Adhikari, SE Brenner
Genome medicine 15 (1), 51, 2023
82023
Nepali image captioning
A Adhikari, S Ghimire
2019 Artificial Intelligence for Transforming Business and Society (AITB) 1, 1-6, 2019
72019
Perturbation robustness analyses reveal important parameters in variant interpretation pipelines
Y Wang, AN Adhikari, U Sunderam, MN Kvale, RJ Currier, RC Gallagher, ...
bioRxiv, 2020.06. 29.173815, 2020
22020
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