Eoin Brodie
Eoin Brodie
Deputy Division Director, Climate and Ecosystem Sciences, Lawrence Berkeley National Lab
Verified email at lbl.gov - Homepage
Title
Cited by
Cited by
Year
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
TZ DeSantis, P Hugenholtz, N Larsen, M Rojas, EL Brodie, K Keller, ...
Applied and environmental microbiology 72 (7), 5069-5072, 2006
79032006
Induction of intestinal Th17 cells by segmented filamentous bacteria
II Ivanov, K Atarashi, N Manel, EL Brodie, T Shima, U Karaoz, D Wei, ...
Cell 139 (3), 485-498, 2009
33042009
NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes
TZ DeSantis, P Hugenholtz, K Keller, EL Brodie, N Larsen, YM Piceno, ...
Nucleic acids research 34 (suppl_2), W394-W399, 2006
10642006
Urban aerosols harbor diverse and dynamic bacterial populations
EL Brodie, TZ DeSantis, JPM Parker, IX Zubietta, YM Piceno, ...
Proceedings of the National Academy of Sciences 104 (1), 299-304, 2007
6672007
High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment
TZ DeSantis, EL Brodie, JP Moberg, IX Zubieta, YM Piceno, GL Andersen
Microbial ecology 53 (3), 371-383, 2007
5412007
Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma
YJ Huang, CE Nelson, EL Brodie, TZ DeSantis, MS Baek, J Liu, T Woyke, ...
Journal of Allergy and Clinical Immunology 127 (2), 372-381. e3, 2011
5292011
Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation
EL Brodie, TZ DeSantis, DC Joyner, SM Baek, JT Larsen, GL Andersen, ...
Applied and environmental microbiology 72 (9), 6288-6298, 2006
5102006
Thousands of microbial genomes shed light on interconnected biogeochemical processes in an aquifer system
K Anantharaman, CT Brown, LA Hug, I Sharon, CJ Castelle, AJ Probst, ...
Nature communications 7, 13219, 2016
4472016
Environmental genomics reveals a single-species ecosystem deep within Earth
D Chivian, EL Brodie, EJ Alm, DE Culley, PS Dehal, TZ DeSantis, ...
Science 322 (5899), 275-278, 2008
3912008
Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients
MJ Cox, M Allgaier, B Taylor, MS Baek, YJ Huang, RA Daly, U Karaoz, ...
PloS one 5 (6), e11044, 2010
3592010
Long-term sustainability of a high-energy, low-diversity crustal biome
LH Lin, PL Wang, D Rumble, J Lippmann-Pipke, E Boice, LM Pratt, ...
Science 314 (5798), 479-482, 2006
3472006
Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata
S Sunagawa, TZ DeSantis, YM Piceno, EL Brodie, MK DeSalvo, ...
The ISME journal 3 (5), 512-521, 2009
3152009
Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance
KC Goldfarb, U Karaoz, CA Hanson, CA Santee, MA Bradford, ...
Frontiers in microbiology 2, 94, 2011
3112011
Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance
KC Goldfarb, U Karaoz, CA Hanson, CA Santee, MA Bradford, ...
Frontiers in microbiology 2, 94, 2011
3112011
A novel ecological role of the Firmicutes identified in thermophilic microbial fuel cells
KC Wrighton, P Agbo, F Warnecke, KA Weber, EL Brodie, TZ DeSantis, ...
The ISME journal 2 (11), 1146-1156, 2008
2922008
Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups
SA Placella, EL Brodie, MK Firestone
Proceedings of the National Academy of Sciences 109 (27), 10931-10936, 2012
2872012
Diversity of 16S rRNA genes within individual prokaryotic genomes
AY Pei, WE Oberdorf, CW Nossa, A Agarwal, P Chokshi, EA Gerz, Z Jin, ...
Applied and environmental microbiology 76 (12), 3886-3897, 2010
2722010
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
K Zhalnina, KB Louie, Z Hao, N Mansoori, UN da Rocha, S Shi, H Cho, ...
Nature microbiology 3 (4), 470-480, 2018
2522018
Environmental whole-genome amplification to access microbial populations in contaminated sediments
CB Abulencia, DL Wyborski, JA Garcia, M Podar, W Chen, SH Chang, ...
Applied and environmental microbiology 72 (5), 3291-3301, 2006
2502006
Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome
CW Nossa, WE Oberdorf, L Yang, JA Aas, BJ Paster, TZ DeSantis, ...
World journal of gastroenterology: WJG 16 (33), 4135, 2010
2482010
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