Vittore F. Scolari
Cytowane przez
Cytowane przez
3D organization of synthetic and scrambled chromosomes
G Mercy, J Mozziconacci, VF Scolari, K Yang, G Zhao, A Thierry, Y Luo, ...
Science 355 (6329), eaaf4597, 2017
Cohesins and condensins orchestrate the 4D dynamics of yeast chromosomes during the cell cycle
L Lazar‐Stefanita, VF Scolari, G Mercy, H Muller, TM Guérin, A Thierry, ...
The EMBO journal 36 (18), 2684-2697, 2017
Seroprevalence of SARS-CoV-2 significantly varies with age: Preliminary results from a mass population screening
G Pagani, F Conti, A Giacomelli, D Bernacchia, R Rondanin, A Prina, ...
Journal of infection 81 (6), e10-e12, 2020
Physical descriptions of the bacterial nucleoid at large scales, and their biological implications
VG Benza, B Bassetti, KD Dorfman, VF Scolari, K Bromek, P Cicuta, ...
Reports on Progress in Physics 75 (7), 076602, 2012
Characterizing meiotic chromosomes' structure and pairing using a designer sequence optimized for Hi‐C
H Muller, VF Scolari, N Agier, A Piazza, A Thierry, G Mercy, ...
Molecular systems biology 14 (7), e8293, 2018
Combined collapse by bridging and self-adhesion in a prototypical polymer model inspired by the bacterial nucleoid
VF Scolari, MC Lagomarsino
Soft matter 11 (9), 1677-1687, 2015
Computer vision for pattern detection in chromosome contact maps
C Matthey-Doret, L Baudry, A Breuer, R Montagne, N Guiglielmoni, ...
Nature communications 11 (1), 5795, 2020
Gene clusters reflecting macrodomain structure respond to nucleoid perturbations
VF Scolari, B Bassetti, B Sclavi, MC Lagomarsino
Molecular BioSystems 7 (3), 878-888, 2011
The genome-scale interplay amongst xenogene silencing, stress response and chromosome architecture in Escherichia coli
R Srinivasan, VF Scolari, MC Lagomarsino, ASN Seshasayee
Nucleic acids research 43 (1), 295-308, 2015
Live-cell micromanipulation of a genomic locus reveals interphase chromatin mechanics
VIP Keizer, S Grosse-Holz, M Woringer, L Zambon, K Aizel, M Bongaerts, ...
Science 377 (6605), 489-495, 2022
Genomic analysis reveals epistatic silencing of “expensive” genes in Escherichia coli K-12
R Srinivasan, D Chandraprakash, R Krishnamurthi, P Singh, VF Scolari, ...
Molecular BioSystems 9 (8), 2021-2033, 2013
Sir3 mediates long-range chromosome interactions in budding yeast
M Ruault, VF Scolari, L Lazar-Stefanita, A Hocher, I Loïodice, R Koszul, ...
Genome research 31 (3), 411-425, 2021
Prevalence of SARS-CoV-2 in an area of unrestricted viral circulation: Mass seroepidemiological screening in Castiglione d’Adda, Italy
G Pagani, A Giacomelli, F Conti, D Bernacchia, R Rondanin, A Prina, ...
PloS one 16 (2), e0246513, 2021
Kinetic signature of cooperativity in the irreversible collapse of a polymer
VF Scolari, G Mercy, R Koszul, A Lesne, J Mozziconacci
Physical review letters 121 (5), 057801, 2018
NuST: analysis of the interplay between nucleoid organization and gene expression
VF Scolari, M Zarei, M Osella, M Cosentino Lagomarsino
Bioinformatics 28 (12), 1643-1644, 2012
Serpentine: a flexible 2D binning method for differential Hi-C analysis
L Baudry, GA Millot, A Thierry, R Koszul, VF Scolari
Bioinformatics 36 (12), 3645-3651, 2020
The nucleoid as a smart polymer
VF Scolari, B Sclavi, M Cosentino Lagomarsino
Frontiers in microbiology 6, 424, 2015
hicstuff: Simple library/pipeline to generate and handle Hi-C data
C Matthey-Doret, L Baudry, A Bignaud, A Cournac, R Montagne, ...
Zenodo. http://doi. org/10.5281/zenodo 4066363, 2020
Chromosome Structure and Dynamics in Bacteria: Theory and Experiments
M Gherardi, V Scolari, RT Dame, M Cosentino-Lagomarsino
Modeling the 3D Conformation of Genomes, 207, 2019
Live-cell magnetic micromanipulation of a genomic locus reveals interphase chromatin mechanics
S Grosse-Holz, V Keizer, M Woringer, L Zambon, K Aizel, M Bongaerts, ...
Bulletin of the American Physical Society, 2023
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