Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases OK Tørresen, B Star, P Mier, MA Andrade-Navarro, A Bateman, P Jarnot, ... Nucleic acids research 47 (21), 10994-11006, 2019 | 290 | 2019 |
Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment LJ Marcos-Zambrano, K Karaduzovic-Hadziabdic, T Loncar Turukalo, ... Frontiers in microbiology 12, 634511, 2021 | 273 | 2021 |
Disentangling the complexity of low complexity proteins P Mier, L Paladin, S Tamana, S Petrosian, B Hajdu-Soltész, A Urbanek, ... Briefings in Bioinformatics 21 (2), 458-472, 2020 | 89 | 2020 |
PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins P Jarnot, J Ziemska-Legiecka, L Dobson, M Merski, P Mier, ... Nucleic acids research 48 (W1), W77-W84, 2020 | 43 | 2020 |
The surprising efficiency of framing geo-spatial time series forecasting as a video prediction task–insights from the iarai traffic4cast competition at neurips 2019 DP Kreil, MK Kopp, D Jonietz, M Neun, A Gruca, P Herruzo, H Martin, ... NeurIPS 2019 competition and demonstration track, 232-241, 2020 | 32 | 2020 |
Traffic4cast at neurips 2020-yet more on the unreasonable effectiveness of gridded geo-spatial processes M Kopp, D Kreil, M Neun, D Jonietz, H Martin, P Herruzo, A Gruca, ... NeurIPS 2020 Competition and Demonstration Track, 325-343, 2021 | 25 | 2021 |
Proteome profiles of different types of thyroid cancers M Gawin, A Wojakowska, M Pietrowska, Ł Marczak, M Chekan, K Jelonek, ... Molecular and cellular endocrinology 472, 68-79, 2018 | 24 | 2018 |
Quantitative conformational analysis of functionally important electrostatic interactions in the intrinsically disordered region of delta subunit of bacterial RNA polymerase V Kubáň, P Srb, H Štégnerová, P Padrta, M Zachrdla, Z Jaseňáková, ... Journal of the American Chemical Society 141 (42), 16817-16828, 2019 | 22 | 2019 |
High-resolution multi-channel weather forecasting–First insights on transfer learning from the Weather4cast Competitions 2021 P Herruzo, A Gruca, L Lliso, X Calbet, P Rípodas, S Hochreiter, M Kopp, ... 2021 IEEE International Conference on Big Data (Big Data), 5750-5757, 2021 | 21 | 2021 |
Traffic4cast at neurips 2021-temporal and spatial few-shot transfer learning in gridded geo-spatial processes C Eichenberger, M Neun, H Martin, P Herruzo, M Spanring, Y Lu, S Choi, ... NeurIPS 2021 Competitions and Demonstrations Track, 97-112, 2022 | 20 | 2022 |
Induction and selection of the most interesting Gene Ontology based multiattribute rules for descriptions of gene groups M Sikora, A Gruca Pattern Recognition Letters 32 (2), 258-269, 2011 | 20 | 2011 |
RuleGO: a logical rules-based tool for description of gene groups by means of Gene Ontology A Gruca, M Sikora, A Polanski Nucleic acids research 39 (suppl_2), W293-W301, 2011 | 19 | 2011 |
CDCEO'21-First Workshop on Complex Data Challenges in Earth Observation A Gruca, P Herruzo, P Rípodas, A Kucik, C Briese, MK Kopp, S Hochreiter, ... Proceedings of the 30th ACM International Conference on Information …, 2021 | 18 | 2021 |
Insights from analyses of low complexity regions with canonical methods for protein sequence comparison P Jarnot, J Ziemska-Legiecka, M Grynberg, A Gruca Briefings in Bioinformatics 23 (5), bbac299, 2022 | 14 | 2022 |
Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment. Front Microbiol 12: 634511 LJ Marcos-Zambrano, K Karaduzovic-Hadziabdic, T Loncar Turukalo, ... | 14 | 2021 |
Advancing microbiome research with machine learning: key findings from the ML4Microbiome COST action D D’Elia, J Truu, L Lahti, M Berland, G Papoutsoglou, M Ceci, A Zomer, ... Frontiers in Microbiology 14, 1257002, 2023 | 13 | 2023 |
Common low complexity regions for SARS-CoV-2 and human proteomes as potential multidirectional risk factor in vaccine development A Gruca, J Ziemska-Legiecka, P Jarnot, E Sarnowska, TJ Sarnowski, ... BMC bioinformatics 22, 1-18, 2021 | 13 | 2021 |
Performance Analysis of. NET Based Object–Relational Mapping Frameworks A Gruca, P Podsiadło Beyond Databases, Architectures, and Structures: 10th International …, 2014 | 13 | 2014 |
Rule based functional description of genes–estimation of the multicriteria rule interestingness measure by the UTA method A Gruca, M Sikora Biocybernetics and Biomedical Engineering 33 (4), 222-234, 2013 | 13 | 2013 |
Image quality assessment using phase spectrum correlation P Skurowski, A Gruca Computer Vision and Graphics: International Conference, ICCVG 2008 Warsaw …, 2009 | 13 | 2009 |