| RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures Z Miao, RW Adamiak, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, ... Rna 21 (6), 1066-1084, 2015 | 131 | 2015 |
| NPDock: a web server for protein-nucleic acid docking I Tuszynska, M Magnus, K Jonak, W Dawson, JM Bujnicki Nucleic Acids Res., 2015 | 125 | 2015 |
| RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme Z Miao, RW Adamiak, M Antczak, RT Batey, AJ Becka, M Biesiada, ... Rna 23 (5), 655-672, 2017 | 118 | 2017 |
| SimRNAweb: a web server for RNA 3D structure modeling with optional restraints M Magnus, MJ Boniecki, W Dawson, JM Bujnicki Nucleic acids research 44 (W1), W315-W319, 2016 | 87 | 2016 |
| Structural bioinformatics of the human spliceosomal proteome I Korneta, M Magnus, JM Bujnicki Nucleic acids research 40 (15), 7046-7065, 2012 | 51 | 2012 |
| Computational modeling of RNA 3D structures, with the aid of experimental restraints M Magnus, D Matelska, G Łach, G Chojnowski, MJ Boniecki, E Purta, ... RNA biology 11 (5), 522-536, 2014 | 43 | 2014 |
| MetaLocGramN: A meta-predictor of protein subcellular localization for Gram-negative bacteria M Magnus, M Pawlowski, JM Bujnicki Biochimica ET Biophysica Acta (BBA)-Proteins and Proteomics 1824 (12), 1425-1433, 2012 | 33 | 2012 |
| Computational modeling of protein–RNA complex structures I Tuszynska, D Matelska, M Magnus, G Chojnowski, JM Kasprzak, ... Methods 65 (3), 310-319, 2014 | 25 | 2014 |
| Structures of microRNA precursors P Kozlowski, J Starega-Roslan, M Legacz, M Magnus, WJ Krzyzosiak Current perspectives in microRNAs (miRNA), 1-16, 2008 | 23* | 2008 |
| RNArchitecture: a database and a classification system of RNA families, with a focus on structural information P Boccaletto, M Magnus, C Almeida, A Żyła, A Astha, R Pluta, B Bagiński, ... Nucleic acids research 46 (D1), D202-D205, 2017 | 15 | 2017 |
| RNA-puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools M Magnus, M Antczak, T Zok, J Wiedemann, P Lukasiak, Y Cao, ... Nucleic acids research 48 (2), 576-588, 2020 | 13 | 2020 |
| RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers Z Miao, RW Adamiak, M Antczak, MJ Boniecki, J Bujnicki, SJ Chen, ... RNA 26 (8), 982-995, 2020 | 12 | 2020 |
| RNA 3D structure prediction guided by independent folding of homologous sequences M Magnus, K Kappel, R Das, JM Bujnicki BMC bioinformatics 20 (1), 1-15, 2019 | 8 | 2019 |
| Rearrangements within the U6 snRNA core during the transition between the two catalytic steps of splicing K Eysmont, K Matylla-Kulińska, A Jaskulska, M Magnus, MM Konarska Molecular cell 75 (3), 538-548. e3, 2019 | 8 | 2019 |
| RNA 3D structure modeling by combination of template-based method ModeRNA, template-free folding with SimRNA, and refinement with QRNAS P Piatkowski, JM Kasprzak, D Kumar, M Magnus, G Chojnowski, ... RNA structure determination, 217-235, 2016 | 8 | 2016 |
| Modeling of protein–RNA complex structures using computational docking methods B Madan, JM Kasprzak, I Tuszynska, M Magnus, K Szczepaniak, ... Computational Design of Ligand Binding Proteins, 353-372, 2016 | 6 | 2016 |
| RNA fragment assembly with experimental restraints G Chojnowski, R Zaborowski, M Magnus, JM Bujnicki bioRxiv, 2021 | | 2021 |
Janusz BujnickiProfessor of Biology, International Institute of Molecular and Cell Biology in WarsawVerified email at genesilico.pl
