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Filip Stefaniak
Filip Stefaniak
Laboratory of Bioinformatics and Protein Engineering International Institute of Molecular and Cell
Verified email at iimcb.gov.pl - Homepage
Title
Cited by
Cited by
Year
MODOMICS: a database of RNA modification pathways. 2021 update
P Boccaletto, F Stefaniak, A Ray, A Cappannini, S Mukherjee, E Purta, ...
Nucleic Acids Research 50 (D1), D231-D235, 2022
542022
Molecularly Imprinted Polymer (MIP) Film with Improved Surface Area Developed by Using Metal-Organic Framework (MOF) for Sensitive Lipocalin (NGAL) Determination.
Z Iskierko, PS Sharma, D Prochowicz, K Fronc, F D'Souza, ...
ACS Appl. Mater. Interfaces 8, 19860-19865, 2016
542016
Structural bases of peptidoglycan recognition by lysostaphin SH3b domain
P Mitkowski, E Jagielska, E Nowak, JM Bujnicki, F Stefaniak, D Niedziałek, ...
Scientific reports 9 (1), 1-14, 2019
442019
Prediction of compounds activity in nuclear receptor signaling and stress pathway assays using machine learning algorithms and low dimensional molecular descriptors
F Stefaniak
Frontiers in Environmental Science 3, 77-84, 2015
282015
RNArchitecture: a database and a classification system of RNA families, with a focus on structural information
P Boccaletto, M Magnus, C Almeida, A Żyła, A Astha, R Pluta, B Bagiński, ...
Nucleic Acids Research 46 (D1), D202-D205, 2018
262018
AnnapuRNA: A scoring function for predicting RNA-small molecule binding poses
F Stefaniak, JM Bujnicki
PLoS computational biology 17 (2), e1008309, 2021
17*2021
Development of dual chitinase inhibitors as potential new treatment for respiratory system diseases
M Mazur, B Dymek, R Koralewski, P Sklepkiewicz, S Olejniczak, ...
Journal of Medicinal Chemistry 62 (15), 7126-7145, 2019
162019
Synthesis and characterization of novel classes of PDE10A inhibitors-1H-1, 3-benzodiazoles and imidazo [1, 2-a] pyrimidines
R Moszczyński-Pętkowski, J Majer, M Borkowska, Ł Bojarski, S Janowska, ...
European Journal of Medicinal Chemistry 155, 96-116, 2018
152018
Modeling of ribonucleic acid–ligand interactions
F Stefaniak, EI Chudyk, M Bodkin, WK Dawson, JM Bujnicki
Wiley Interdisciplinary Reviews: Computational Molecular Science 5 (6), 425-439, 2015
142015
Human RNA cap1 methyltransferase CMTr1 cooperates with RNA helicase DHX15 to modify RNAs with highly structured 5′ termini
D Toczydlowska-Socha, MM Zielinska, M Kurkowska, Astha, CF Almeida, ...
Philosophical Transactions of the Royal Society B: Biological Sciences 373 …, 2018
102018
Novel inhibitors of the rRNA ErmC'methyltransferase to block resistance to macrolides, lincosamides, streptogramine B antibiotics
IP Foik, I Tuszynska, M Feder, E Purta, F Stefaniak, JM Bujnicki
European Journal of Medicinal Chemistry 146, 60-67, 2018
92018
Discovery of selective, orally bioavailable inhibitor of mouse chitotriosidase
M Mazur, A Bartoszewicz, B Dymek, M Salamon, G Andryianau, ...
Bioorganic & Medicinal Chemistry Letters 28 (3), 310-314, 2018
92018
RNAProbe: a web server for normalization and analysis of RNA structure probing data
TK Wirecki, K Merdas, A Bernat, MJ Boniecki, JM Bujnicki, F Stefaniak
Nucleic Acids Research 48 (W1), W292-W299, 2020
82020
Benzoxazepine-derived selective, orally bioavailable inhibitor of human acidic mammalian chitinase
G Andryianau, M Kowalski, MC Piotrowicz, AA Rajkiewicz, B Dymek, ...
ACS medicinal chemistry letters 11 (6), 1228-1235, 2020
52020
Discovery of TRAF-2 and NCK-interacting kinase (TNIK) inhibitors by ligand-based virtual screening methods
A Bujak, F Stefaniak, D Zdzalik, P Grygielewicz, B Dymek, M Zagozda, ...
MedChemComm 6 (8), 1564-1572, 2015
52015
Luciferase reporter assay for small-molecule inhibitors of MIR92b-3p function: screening cyanopeptolins produced by Nostoc from the Baltic Sea
P Brzuzan, H Mazur-Marzec, M Florczyk, F Stefaniak, A Fidor, R Konkel, ...
Toxicology in Vitro 68, 104951, 2020
42020
fingeRNAt—A novel tool for high-throughput analysis of nucleic acid-ligand interactions
NA Szulc, Z Mackiewicz, JM Bujnicki, F Stefaniak
PLOS Computational Biology 18 (6), e1009783, 2022
2022
DEGRONOPEDIA-a web server for proteome-wide inspection of degrons
NA Szulc, F Stefaniak, M Piechota, A Cappannini, JM Bujnicki, ...
bioRxiv, 2022
2022
Computational Modeling Methods for 3D Structure Prediction of Ribozymes
P Ghosh, C Nithin, A Joshi, F Stefaniak, TK Wirecki, JM Bujnicki
Ribozymes 2, 861-881, 2021
2021
Discovery of an advanced dual chitinase inhibitors OAT-870: New potential therapeutic in therapy of lung diseases
M Kowalski, M Mazur, S Olejniczak, R Koralewski, B Dymek, ...
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 258, 2019
2019
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Articles 1–20