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Barry Stoddard
Barry Stoddard
Professor. Division of Basic Sciences, Fred Hutchinson Cancer Research Center
Verified email at fredhutch.org - Homepage
Title
Cited by
Cited by
Year
Design of a novel globular protein fold with atomic-level accuracy
B Kuhlman, G Dantas, GC Ireton, G Varani, BL Stoddard, D Baker
science 302 (5649), 1364-1368, 2003
20452003
De novo computational design of retro-aldol enzymes
L Jiang, EA Althoff, FR Clemente, L Doyle, D Rothlisberger, A Zanghellini, ...
science 319 (5868), 1387-1391, 2008
14052008
Computational design of an enzyme catalyst for a stereoselective bimolecular Diels-Alder reaction
JB Siegel, A Zanghellini, HM Lovick, G Kiss, AR Lambert, JL St. Clair, ...
Science 329 (5989), 309-313, 2010
11102010
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes
RJ Roberts, M Belfort, T Bestor, AS Bhagwat, TA Bickle, J Bitinaite, ...
Nucleic acids research 31 (7), 1805-1812, 2003
9102003
The crystal structure of TAL effector PthXo1 bound to its DNA target
ANS Mak, P Bradley, RA Cernadas, AJ Bogdanove, BL Stoddard
Science 335 (6069), 716-719, 2012
7422012
Homing endonuclease structure and function
BL Stoddard
Quarterly reviews of biophysics 38 (1), 49-95, 2005
7192005
Homing endonucleases: structural and functional insight into the catalysts of intron/intein mobility
BS Chevalier, BL Stoddard
Nucleic acids research 29 (18), 3757-3774, 2001
6472001
Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme
WG Scott, JB Murray, JRP Arnold, BL Stoddard, A Klug
Science 274 (5295), 2065-2069, 1996
5891996
The allosteric regulation of pyruvate kinase by fructose-1, 6-bisphosphate
MS Jurica, A Mesecar, PJ Heath, W Shi, T Nowak, BL Stoddard
Structure 6 (2), 195-210, 1998
5071998
Computational design of ligand-binding proteins with high affinity and selectivity
CE Tinberg, SD Khare, J Dou, L Doyle, JW Nelson, A Schena, ...
Nature 501 (7466), 212-216, 2013
4842013
Biocontainment of genetically modified organisms by synthetic protein design
DJ Mandell, MJ Lajoie, MT Mee, R Takeuchi, G Kuznetsov, JE Norville, ...
Nature 518 (7537), 55-60, 2015
4692015
Computational thermostabilization of an enzyme
A Korkegian, ME Black, D Baker, BL Stoddard
Science 308 (5723), 857-860, 2005
4602005
Computational redesign of endonuclease DNA binding and cleavage specificity
J Ashworth, JJ Havranek, CM Duarte, D Sussman, RJ Monnat Jr, ...
Nature 441 (7093), 656-659, 2006
4292006
Homing endonucleases: from microbial genetic invaders to reagents for targeted DNA modification
BL Stoddard
Structure 19 (1), 7-15, 2011
3982011
Structure of the C2 domain of human factor VIII at 1.5 Å resolution
KP Pratt, BW Shen, K Takeshima, EW Davie, K Fujikawa, BL Stoddard
Nature 402 (6760), 439-442, 1999
3981999
Accumulation of free ADP-ribose from mitochondria mediates oxidative stress-induced gating of TRPM2 cation channels
AL Perraud, CL Takanishi, B Shen, S Kang, MK Smith, C Schmitz, ...
Journal of Biological Chemistry 280 (7), 6138-6148, 2005
3922005
Computational redesign of protein-protein interaction specificity
T Kortemme, LA Joachimiak, AN Bullock, AD Schuler, BL Stoddard, ...
Nature structural & molecular biology 11 (4), 371-379, 2004
3852004
Increased Diels-Alderase activity through backbone remodeling guided by Foldit players
CB Eiben, JB Siegel, JB Bale, S Cooper, F Khatib, BW Shen, F Players, ...
Nature biotechnology 30 (2), 190-192, 2012
3692012
A synthetic sex ratio distortion system for the control of the human malaria mosquito
R Galizi, LA Doyle, M Menichelli, F Bernardini, A Deredec, A Burt, ...
Nature communications 5 (1), 3977, 2014
3602014
Design, activity, and structure of a highly specific artificial endonuclease
BS Chevalier, T Kortemme, MS Chadsey, D Baker, RJ Monnat, ...
Molecular cell 10 (4), 895-905, 2002
3542002
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