| Dedicated SNARE s and specialized TRIM cargo receptors mediate secretory autophagy T Kimura, J Jia, S Kumar, SW Choi, Y Gu, M Mudd, N Dupont, S Jiang, ... The EMBO journal 36 (1), 42-60, 2017 | 294 | 2017 |
| Mechanism of Stx17 recruitment to autophagosomes via IRGM and mammalian Atg8 proteins S Kumar, A Jain, F Farzam, J Jia, Y Gu, SW Choi, MH Mudd, ... Journal of Cell Biology 217 (3), 997-1013, 2018 | 138 | 2018 |
| Phosphorylation of syntaxin 17 by TBK1 controls autophagy initiation S Kumar, Y Gu, YP Abudu, JA Bruun, A Jain, F Farzam, M Mudd, ... Developmental cell 49 (1), 130-144. e6, 2019 | 123 | 2019 |
| Cellular and molecular mechanism for secretory autophagy T Kimura, J Jia, A Claude-Taupin, S Kumar, SW Choi, Y Gu, M Mudd, ... Autophagy 13 (6), 1084-1085, 2017 | 88 | 2017 |
| Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model M Hammer, M Huisman, A Rigano, U Boehm, JJ Chambers, N Gaudreault, ... Nature methods 18 (12), 1427-1440, 2021 | 41 | 2021 |
| Comparing lifeact and phalloidin for super-resolution imaging of actin in fixed cells H Mazloom-Farsibaf, F Farzam, M Fazel, MJ Wester, MBM Meddens, ... PLoS One 16 (1), e0246138, 2021 | 30 | 2021 |
| Minimum Information guidelines for fluorescence microscopy: increasing the value, quality, and fidelity of image data M Huisman, M Hammer, A Rigano, F Farzam, R Gopinathan, C Smith, ... arXiv.org, 2020 | 16 | 2020 |
| Sequential super-resolution imaging using DNA strand displacement S Pallikkuth, C Martin, F Farzam, JS Edwards, MR Lakin, DS Lidke, ... PloS one 13 (8), e0203291, 2018 | 13 | 2018 |
| A MATLAB-based instrument control package for fluorescence imaging S Pallikkuth, M Meddens, M Fazel, H Farsibaf, F Farzam, M Wester, ... Biophysical journal 114 (3), 532a, 2018 | 8 | 2018 |
| Minimum Information guidelines for fluorescence microscopy: increasing the value, quality, and fidelity of image data. arXiv [q-bio. QM](2019) M Huisman, M Hammer, A Rigano, F Farzam, R Gopinathan, C Smith, ... | 8 | 1910 |
| Automated multi-target super-resolution microscopy with trust regions DJ Schodt, F Farzam, S Liu, KA Lidke Biomedical Optics Express 14 (1), 429-440, 2023 | 5 | 2023 |
| SMITE: Single Molecule Imaging Toolbox Extraordinaire (MATLAB) DJ Schodt, MJ Wester, M Fazel, S Khan, H Mazloom-Farsibaf, S Pallikkuth, ... Journal of Open Source Software 8 (90), 5563, 2023 | 3 | 2023 |
| Live-Cell Imaging of mRNP–NPC Interactions in Budding Yeast A Lari, F Farzam, P Bensidoun, M Oeffinger, D Zenklusen, D Grunwald, ... Methods in Molecular Biology 2038, 131-150, 2019 | 3 | 2019 |
| The 4DN-OME Ontology: an OME-OWL Extension with Emphasis on Usability, Minimum Information Guidelines and Quality Control for Super-resolution Fluorescence Microscopy. M Hammer, A Rigano, F Farzam, M Huisman, D Grunwald, ... SWAT4HCLS, 153-154, 2019 | 3 | 2019 |
| Automated multiple target superresolution imaging F Farzam, KA Lidke Frontiers in Optics, FTh3D. 3, 2017 | 2 | 2017 |
| SMITE (single molecule imaging toolbox extraordinaire), a MATLAB package D Schodt, MJ Wester, M Fazel, H Mazloom-Farsibaf, S Pallikkuth, ... Biophysical Journal 122 (3), 275a, 2023 | | 2023 |
| Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model (vol 18, pg 1427, 2021) M Hammer, M Huisman, A Rigano, U Boehm, JJ Chambers, N Gaudreault, ... NATURE METHODS 19 (2), 255-255, 2022 | | 2022 |
| Author Correction: Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model M Hammer, M Huisman, A Rigano, U Boehm, JJ Chambers, N Gaudreault, ... Nature methods 19 (2), 255, 2022 | | 2022 |
| Towards community-driven metadata standards for light microscopy: tiered guidelines extending the OME model P Bajcsy, M Hammer, M Huisman, A Rigano, U Boehm, JJ Chambers, ... Peter Bajcsy, Mathias Hammer, Maximiliaan Huisman, Alex Rigano, Ulrike Boehm …, 2021 | | 2021 |
| High-Throughput Automated Sequential Superresolution Imaging of Membrane Proteins DJ Schodt, F Farzam, KA Lidke Biophysical Journal 118 (3), 146a, 2020 | | 2020 |
