| The ISW1 and CHD1 ATP-dependent chromatin remodelers compete to set nucleosome spacing in vivo J Ocampo, RV Chereji, PR Eriksson, DJ Clark Nucleic Acids Research 44 (10), 4625-4635, 2016 | 148 | 2016 |
| Precise genome-wide mapping of single nucleosomes and linkers in vivo RV Chereji, S Ramachandran, TD Bryson, S Henikoff Genome Biology 19 (1), 19, 2018 | 138 | 2018 |
| MNase-Sensitive Complexes in Yeast: Nucleosomes and Non-histone Barriers RV Chereji, J Ocampo, DJ Clark Molecular Cell 65 (3), 565–577, 2017 | 133 | 2017 |
| Quantitative MNase-seq accurately maps nucleosome occupancy levels RV Chereji, TD Bryson, S Henikoff Genome biology 20, 1-18, 2019 | 107 | 2019 |
| RSC-dependent constructive and destructive interference between opposing arrays of phased nucleosomes in yeast D Ganguli, RV Chereji, JR Iben, HA Cole, DJ Clark Genome Research, gr. 177014.114, 2014 | 100 | 2014 |
| Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in Drosophila melanogaster RV Chereji, TW Kan, MK Grudniewska, AV Romashchenko, E Berezikov, ... Nucleic Acids Research 44 (3), 1036-1051, 2015 | 94 | 2015 |
| Major determinants of nucleosome positioning RV Chereji, DJ Clark Biophysical Journal, 2018 | 84 | 2018 |
| Noise and interlocking signaling pathways promote distinct transcription factor dynamics in response to different stresses N Petrenko, RV Chereji, MN McClean, AV Morozov, JR Broach Molecular Biology of the Cell 24 (12), 2045-2057, 2013 | 84 | 2013 |
| Heavy transcription of yeast genes correlates with differential loss of histone H2B relative to H4 and queued RNA polymerases HA Cole, J Ocampo, JR Iben, RV Chereji, DJ Clark Nucleic Acids Research 42 (20), 12512-12522, 2014 | 81 | 2014 |
| Conventional and pioneer modes of glucocorticoid receptor interaction with enhancer chromatin in vivo TA Johnson, RV Chereji, DA Stavreva, SA Morris, GL Hager, DJ Clark Nucleic Acids Research 46 (1), 203-214, 2018 | 77 | 2018 |
| A dynamic interplay of nucleosome and Msn2 binding regulates kinetics of gene activation and repression following stress N Elfving, RV Chereji, V Bharatula, S Björklund, AV Morozov, JR Broach Nucleic Acids Research 42 (9), 5468-5482, 2014 | 77 | 2014 |
| SWI/SNF and RSC cooperate to reposition and evict promoter nucleosomes at highly expressed genes in yeast Y Rawal, RV Chereji, H Qiu, S Ananthakrishnan, CK Govind, DJ Clark, ... Genes & Development, 2018 | 74 | 2018 |
| Statistical mechanics of nucleosome ordering by chromatin-structure-induced two-body interactions RV Chereji, D Tolkunov, G Locke, AV Morozov Physical Review E 83 (5), 050903, 2011 | 67 | 2011 |
| Ubiquitous nucleosome crowding in the yeast genome RV Chereji, AV Morozov Proceedings of the National Academy of Sciences 111 (14), 5236-5241, 2014 | 63 | 2014 |
| Statistical Mechanics of Nucleosomes Constrained by Higher-Order Chromatin Structure RV Chereji, AV Morozov Journal of Statistical Physics, 1-26, 2011 | 63 | 2011 |
| Functional roles of nucleosome stability and dynamics RV Chereji, AV Morozov Briefings in Functional Genomics 14 (1), 50-60, 2014 | 61 | 2014 |
| Genome-wide cooperation by HAT Gcn5, remodeler SWI/SNF, and chaperone Ydj1 in promoter nucleosome eviction and transcriptional activation H Qiu, RV Chereji, C Hu, HA Cole, Y Rawal, DJ Clark, AG Hinnebusch Genome Research 26 (2), 211-225, 2016 | 60 | 2016 |
| Mechanism of FACT removal from transcribed genes by anticancer drugs curaxins HW Chang, ME Valieva, A Safina, RV Chereji, J Wang, OI Kulaeva, ... Science Advances 4 (11), eaav2131, 2018 | 54 | 2018 |
| Single-Molecule Analysis Reveals Linked Cycles of RSC Chromatin Remodeling and Ace1p Transcription Factor Binding in Yeast GD Mehta, DA Ball, PR Eriksson, RV Chereji, DJ Clark, JG McNally, ... Molecular Cell 72 (5), 875-887. e9, 2018 | 52 | 2018 |
| Contrasting roles of the RSC and ISW1/CHD1 chromatin remodelers in RNA polymerase II elongation and termination J Ocampo, RV Chereji, PR Eriksson, DJ Clark Genome Research, gr. 242032.118, 2019 | 48 | 2019 |
David J. ClarkSenior Investigator, NICHD, NIHVerified email at mail.nih.gov
