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Brian Haas
Brian Haas
Broad Institute
Verified email at broadinstitute.org - Homepage
Title
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Cited by
Year
Full-length transcriptome assembly from RNA-Seq data without a reference genome
MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ...
Nature biotechnology 29 (7), 644-652, 2011
173102011
UCHIME improves sensitivity and speed of chimera detection
RC Edgar, BJ Haas, JC Clemente, C Quince, R Knight
Bioinformatics 27 (16), 2194-2200, 2011
143612011
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
S Kaul, HL Koo, J Jenkins, M Rizzo, T Rooney, LJ Tallon, T Feldblyum, ...
Nature 408 (6814), 796-815, 2000
111472000
Structure, function and diversity of the healthy human microbiome
C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ...
nature 486 (7402), 207, 2012
10259*2012
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
BJ Haas, A Papanicolaou, M Yassour, M Grabherr, PD Blood, J Bowden, ...
Nature protocols 8 (8), 1494-1512, 2013
78562013
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
BJ Haas, D Gevers, AM Earl, M Feldgarden, DV Ward, G Giannoukos, ...
Genome research 21 (3), 494-504, 2011
34772011
Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
BJ Haas, SL Salzberg, W Zhu, M Pertea, JE Allen, J Orvis, O White, ...
Genome Biol 9 (1), R7, 2008
26722008
Next-generation characterization of the cancer cell line encyclopedia
M Ghandi, FW Huang, J Jané-Valbuena, GV Kryukov, CC Lo, ...
Nature 569 (7757), 503-508, 2019
25102019
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
Nature 486, 215-221, 2012
2422*2012
Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data
MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ...
Nature biotechnology 29 (7), 644, 2011
21422011
The genome of the African trypanosome Trypanosoma brucei
M Berriman, E Ghedin, C Hertz-Fowler, G Blandin, H Renauld, ...
Science 309 (5733), 416-422, 2005
19992005
Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies
BJ Haas, AL Delcher, SM Mount, JR Wortman, RK Smith Jr, LI Hannick, ...
Nucleic acids research 31 (19), 5654-5666, 2003
18242003
The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease
NM El-Sayed, PJ Myler, DC Bartholomeu, D Nilsson, G Aggarwal, ...
Science Signalling 309 (5733), 409, 2005
17892005
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
BJ Haas, S Kamoun, MC Zody, RHY Jiang, RE Handsaker, LM Cano, ...
Nature 461 (7262), 393-398, 2009
16832009
Corrigendum: Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus
WC Nierman, A Pain, MJ Anderson, JR Wortman, HS Kim, J Arroyo, ...
Nature 439 (7075), 502-502, 2006
1665*2006
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus
WC Nierman, A Pain, MJ Anderson, JR Wortman, HS Kim, J Arroyo, ...
Nature 438 (7071), 1151-1156, 2005
16652005
Genome sequence of Aedes aegypti, a major arbovirus vector
V Nene, JR Wortman, D Lawson, B Haas, C Kodira, ZJ Tu, B Loftus, Z Xi, ...
Science Signalling 316 (5832), 1718, 2007
13502007
The TIGR rice genome annotation resource: improvements and new features
S Ouyang, W Zhu, J Hamilton, H Lin, M Campbell, K Childs, ...
Nucleic acids research 35 (suppl 1), D883-D887, 2007
12772007
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ...
Nature 452 (7190), 991-996, 2008
12512008
The draft genome of the transgenic tropical fruit tree papaya
R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ...
Carica papaya, 991-996, 2008
1251*2008
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