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Shigeki Nakagome
Shigeki Nakagome
Ussher Assistant Professor in Genomic Medicine, School of Medicine, Trinity College Dublin
Verified email at tcd.ie - Homepage
Title
Cited by
Cited by
Year
Dysbiosis of salivary microbiota in inflammatory bowel disease and its association with oral immunological biomarkers
HS Said, W Suda, S Nakagome, H Chinen, K Oshima, S Kim, R Kimura, ...
DNA research 21 (1), 15-25, 2014
3882014
The prehistoric peopling of Southeast Asia
H McColl, F Racimo, L Vinner, F Demeter, T Gakuhari, JV Moreno-Mayar, ...
Science 361 (6397), 88-92, 2018
3542018
A time transect of exomes from a Native American population before and after European contact
J Lindo, E Huerta-Sánchez, S Nakagome, M Rasmussen, B Petzelt, ...
Nature communications 7 (1), 13175, 2016
1462016
Genetics of schizophrenia: ready to translate?
C Foley, A Corvin, S Nakagome
Current psychiatry reports 19, 1-9, 2017
742017
Kernel approximate Bayesian computation in population genetic inferences
S Nakagome, K Fukumizu, S Mano
Statistical applications in genetics and molecular biology 12 (6), 667-678, 2013
642013
Ancient Jomon genome sequence analysis sheds light on migration patterns of early East Asian populations
T Gakuhari, S Nakagome, S Rasmussen, ME Allentoft, T Sato, ...
Communications biology 3 (1), 437, 2020
542020
Genome-wide SNP analysis reveals population structure and demographic history of the Ryukyu islanders in the southern part of the Japanese archipelago
T Sato, S Nakagome, C Watanabe, K Yamaguchi, A Kawaguchi, ...
Molecular Biology and Evolution 31 (11), 2929-2940, 2014
532014
Population‐specific susceptibility to Crohn's disease and ulcerative colitis; dominant and recessive relative risks in the Japanese population
S Nakagome, Y Takeyama, S Mano, S Sakisaka, T Matsui, S Kawamura, ...
Annals of human genetics 74 (2), 126-136, 2010
482010
Unequal rates of Y chromosome gene divergence during speciation of the family Ursidae
S Nakagome, J Pecon-Slattery, R Masuda
Molecular Biology and Evolution 25 (7), 1344-1356, 2008
482008
Model-based verification of hypotheses on the origin of modern Japanese revisited by Bayesian inference based on genome-wide SNP data
S Nakagome, T Sato, H Ishida, T Hanihara, T Yamaguchi, R Kimura, ...
Molecular Biology and Evolution 32 (6), 1533-1543, 2015
472015
Deep history of East Asian populations revealed through genetic analysis of the Ainu
C Jeong, S Nakagome, A Di Rienzo
Genetics 202 (1), 261-272, 2016
402016
Ancient genomics reveals tripartite origins of Japanese populations
NP Cooke, V Mattiangeli, LM Cassidy, K Okazaki, CA Stokes, S Onbe, ...
Science advances 7 (38), eabh2419, 2021
392021
Estimating the ages of selection signals from different epochs in human history
S Nakagome, G Alkorta-Aranburu, R Amato, B Howie, BM Peter, ...
Molecular Biology and Evolution 33 (3), 657-669, 2016
392016
Crohn's Disease Risk Alleles on the NOD2 Locus Have Been Maintained by Natural Selection on Standing Variation
S Nakagome, S Mano, L Kozlowski, JM Bujnicki, H Shibata, Y Fukumaki, ...
Molecular biology and evolution 29 (6), 1569-1585, 2012
342012
Rapid evolution of a skin-lightening allele in southern African KhoeSan
M Lin, RL Siford, AR Martin, S Nakagome, M Möller, EG Hoal, ...
Proceedings of the National Academy of Sciences 115 (52), 13324-13329, 2018
232018
Mapping variation in cellular and transcriptional response to 1, 25-dihydroxyvitamin D3 in peripheral blood mononuclear cells
SN Kariuki, JC Maranville, SS Baxter, C Jeong, S Nakagome, CL Hrusch, ...
PloS one 11 (7), e0159779, 2016
232016
Finding the Factors of Reduced Genetic Diversity on X Chromosomes of Macaca fascicularis: Male-Driven Evolution, Demography, and Natural Selection
N Osada, S Nakagome, S Mano, Y Kameoka, I Takahashi, K Terao
Genetics 195 (3), 1027-1035, 2013
232013
The evolving Japanese: the dual structure hypothesis at 30
MJ Hudson, S Nakagome, JB Whitman
Evolutionary Human Sciences 2, e6, 2020
222020
Autosomal and Y-chromosomal STR markers reveal a close relationship between Hokkaido Ainu and Ryukyu islanders
K Koganebuchi, T Katsumura, S Nakagome, H Ishida, S Kawamura, ...
Anthropological Science 120 (3), 199-208, 2012
212012
An ancestral haplotype of the human PERIOD2 gene associates with reduced sensitivity to light-induced melatonin suppression
T Akiyama, T Katsumura, S Nakagome, S Lee, K Joh, H Soejima, ...
PLoS One 12 (6), e0178373, 2017
202017
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