Shigeki Nakagome
Shigeki Nakagome
Ussher Assistant Professor in Genomic Medicine, School of Medicine, Trinity Collge Dublin
Verified email at tcd.ie - Homepage
TitleCited byYear
Dysbiosis of salivary microbiota in inflammatory bowel disease and its association with oral immunological biomarkers
HS Said, W Suda, S Nakagome, H Chinen, K Oshima, S Kim, R Kimura, ...
DNA research 21 (1), 15-25, 2014
1652014
The prehistoric peopling of Southeast Asia
H McColl, F Racimo, L Vinner, F Demeter, T Gakuhari, JV Moreno-Mayar, ...
Science 361 (6397), 88-92, 2018
552018
A time transect of exomes from a Native American population before and after European contact
J Lindo, E Huerta-Sánchez, S Nakagome, M Rasmussen, B Petzelt, ...
Nature communications 7 (1), 1-11, 2016
542016
Unequal rates of Y chromosome gene divergence during speciation of the family Ursidae
S Nakagome, J Pecon-Slattery, R Masuda
Molecular biology and evolution 25 (7), 1344-1356, 2008
412008
Kernel approximate Bayesian computation in population genetic inferences
S Nakagome, K Fukumizu, S Mano
Statistical applications in genetics and molecular biology 12 (6), 667-678, 2013
402013
Population‐specific susceptibility to Crohn's disease and ulcerative colitis; dominant and recessive relative risks in the Japanese population
S Nakagome, Y Takeyama, S Mano, S Sakisaka, T Matsui, S Kawamura, ...
Annals of human genetics 74 (2), 126-136, 2010
402010
Estimating the ages of selection signals from different epochs in human history
S Nakagome, G Alkorta-Aranburu, R Amato, B Howie, BM Peter, ...
Molecular biology and evolution 33 (3), 657-669, 2016
282016
Genome-wide SNP analysis reveals population structure and demographic history of the ryukyu islanders in the southern part of the Japanese archipelago
T Sato, S Nakagome, C Watanabe, K Yamaguchi, A Kawaguchi, ...
Molecular biology and evolution 31 (11), 2929-2940, 2014
272014
Model-based verification of hypotheses on the origin of modern Japanese revisited by Bayesian inference based on genome-wide SNP data
S Nakagome, T Sato, H Ishida, T Hanihara, T Yamaguchi, R Kimura, ...
Molecular biology and evolution 32 (6), 1533-1543, 2015
202015
Crohn's Disease Risk Alleles on the NOD2 Locus Have Been Maintained by Natural Selection on Standing Variation
S Nakagome, S Mano, L Kozlowski, JM Bujnicki, H Shibata, Y Fukumaki, ...
Molecular biology and evolution 29 (6), 1569-1585, 2012
192012
Deep history of East Asian populations revealed through genetic analysis of the Ainu
C Jeong, S Nakagome, A Di Rienzo
Genetics 202 (1), 261-272, 2016
152016
Genetics of schizophrenia: ready to translate?
C Foley, A Corvin, S Nakagome
Current psychiatry reports 19 (9), 61, 2017
142017
Comment on “Nuclear genomic sequences reveal that polar bears are an old and distinct bear lineage”
S Nakagome, S Mano, M Hasegawa
Science 339 (6127), 1522-1522, 2013
142013
Autosomal and Y-chromosomal STR markers reveal a close relationship between Hokkaido Ainu and Ryukyu islanders
K Koganebuchi, T Katsumura, S Nakagome, H Ishida, S Kawamura, ...
Anthropological Science, 120322, 2012
132012
Finding the factors of reduced genetic diversity on X chromosomes of Macaca fascicularis: male-driven evolution, demography, and natural selection
N Osada, S Nakagome, S Mano, Y Kameoka, I Takahashi, K Terao
Genetics 195 (3), 1027-1035, 2013
122013
Response to comment on “Nuclear genomic sequences reveal that polar bears are an old and distinct bear lineage”
F Hailer, VE Kutschera, BM Hallström, SR Fain, JA Leonard, U Arnason, ...
Science 339 (6127), 1522-1522, 2013
122013
Confounding effects of microbiome on the susceptibility of TNFSF15 to Crohn’s disease in the Ryukyu Islands
S Nakagome, H Chinen, A Iraha, A Hokama, Y Takeyama, S Sakisaka, ...
Human genetics 136 (4), 387-397, 2017
102017
Natural allelic variations of xenobiotic-metabolizing enzymes affect sexual dimorphism in Oryzias latipes
T Katsumura, S Oda, S Nakagome, T Hanihara, H Kataoka, H Mitani, ...
Proceedings of the Royal Society B: Biological Sciences 281 (1797), 20142259, 2014
82014
An ancestral haplotype of the human PERIOD2 gene associates with reduced sensitivity to light-induced melatonin suppression
T Akiyama, T Katsumura, S Nakagome, S Lee, K Joh, H Soejima, ...
PloS one 12 (6), 2017
62017
Patterns of transcriptional response to 1, 25-dihydroxyvitamin D3 and bacterial lipopolysaccharide in primary human monocytes
SN Kariuki, JD Blischak, S Nakagome, DB Witonsky, A Di Rienzo
G3: Genes, Genomes, Genetics 6 (5), 1345-1355, 2016
62016
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