J Gregory Caporaso
TitleCited byYear
QIIME allows analysis of high-throughput community sequencing data
JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ...
Nature methods 7 (5), 335, 2010
174412010
Human gut microbiome viewed across age and geography
T Yatsunenko, FE Rey, MJ Manary, I Trehan, MG Dominguez-Bello, ...
nature 486 (7402), 222, 2012
39712012
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
JG Caporaso, CL Lauber, WA Walters, D Berg-Lyons, J Huntley, N Fierer, ...
The ISME journal 6 (8), 1621, 2012
39012012
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
JG Caporaso, CL Lauber, WA Walters, D Berg-Lyons, CA Lozupone, ...
Proceedings of the national academy of sciences 108 (Supplement 1), 4516-4522, 2011
34362011
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
MGI Langille, J Zaneveld, JG Caporaso, D McDonald, D Knights, ...
Nature biotechnology 31 (9), 814, 2013
32272013
PyNAST: a flexible tool for aligning sequences to a template alignment
JG Caporaso, K Bittinger, FD Bushman, TZ DeSantis, GL Andersen, ...
Bioinformatics 26 (2), 266-267, 2009
26372009
Soil bacterial and fungal communities across a pH gradient in an arable soil
J Rousk, E Bĺĺth, PC Brookes, CL Lauber, C Lozupone, JG Caporaso, ...
The ISME journal 4 (10), 1340, 2010
16862010
Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing
NA Bokulich, S Subramanian, JJ Faith, D Gevers, JI Gordon, R Knight, ...
Nature methods 10 (1), 57, 2013
13802013
Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
N Fierer, JW Leff, BJ Adams, UN Nielsen, ST Bates, CL Lauber, S Owens, ...
Proceedings of the National Academy of Sciences 109 (52), 21390-21395, 2012
8632012
Moving pictures of the human microbiome
JG Caporaso, CL Lauber, EK Costello, D Berg-Lyons, A Gonzalez, ...
Genome biology 12 (5), R50, 2011
7412011
Examining the global distribution of dominant archaeal populations in soil
ST Bates, D Berg-Lyons, JG Caporaso, WA Walters, R Knight, N Fierer
The ISME journal 5 (5), 908, 2011
7352011
Defining seasonal marine microbial community dynamics
JA Gilbert, JA Steele, JG Caporaso, L Steinbrück, J Reeder, B Temperton, ...
The ISME journal 6 (2), 298, 2012
6302012
Cohabiting family members share microbiota with one another and with their dogs
SJ Song, C Lauber, EK Costello, CA Lozupone, G Humphrey, ...
elife 2, e00458, 2013
5102013
Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes
H Chu, N Fierer, CL Lauber, JG Caporaso, R Knight, P Grogan
Environmental Microbiology 12 (11), 2998-3006, 2010
4492010
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457, 2017
4262017
The under-recognized dominance of Verrucomicrobia in soil bacterial communities
GT Bergmann, ST Bates, KG Eilers, CL Lauber, JG Caporaso, WA Walters, ...
Soil Biology and Biochemistry 43 (7), 1450-1455, 2011
3912011
Advancing our understanding of the human microbiome using QIIME
JA Navas-Molina, JM Peralta-Sánchez, A González, PJ McMurdie, ...
Methods in enzymology 531, 371-444, 2013
387*2013
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome
D McDonald, JC Clemente, J Kuczynski, JR Rideout, J Stombaugh, ...
GigaScience 1 (1), 7, 2012
3692012
Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys
JJ Werner, O Koren, P Hugenholtz, TZ DeSantis, WA Walters, ...
The ISME journal 6 (1), 94, 2012
3612012
Using QIIME to analyze 16S rRNA gene sequences from microbial communities
J Kuczynski, J Stombaugh, WA Walters, A González, JG Caporaso, ...
Current protocols in bioinformatics 36 (1), 10.7. 1-10.7. 20, 2011
3502011
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Articles 1–20