Oznur Tastan
Oznur Tastan
Associate Professor, Sabanci University
Verified email at - Homepage
Cited by
Cited by
Prediction of interactions between HIV-1 and human proteins by information integration
O Tastan, Y Qi, JG Carbonell, J Klein-Seetharaman
Pacific Symposium on Biocomputing 2009, 516-527, 2009
Semi-supervised multi-task learning for predicting interactions between HIV-1 and human proteins
Y Qi, O Tastan, JG Carbonell, J Klein-Seetharaman, J Weston
Bioinformatics 26 (18), i645-i652, 2010
MatchMaker: a deep learning framework for drug synergy prediction
HI Kuru, O Tastan, AE Cicek
IEEE/ACM transactions on computational biology and bioinformatics 19 (4 …, 2021
Integromic analysis of genetic variation and gene expression identifies networks for cardiovascular disease phenotypes
C Yao, BH Chen, R Joehanes, B Otlu, X Zhang, C Liu, T Huan, O Tastan, ...
Circulation 131 (6), 536-549, 2015
Discovering lncRNA Mediated Sponge Interactions in Breast Cancer Molecular Subtypes
G Olgun, O Sahin, O Tastan
BMC Genomics, 209015, 2018
An inference attack on genomic data using kinship, complex correlations, and phenotype information
I Deznabi, M Mobayen, N Jafari, O Tastan, E Ayday
IEEE/ACM transactions on computational biology and bioinformatics 15 (4 …, 2017
Human immunodeficiency virus type 1 Vpr: oligomerization is an essential feature for its incorporation into virus particles
NJ Venkatachari, LA Walker, O Tastan, T Le, TM Dempsey, Y Li, ...
Virology journal 7, 1-11, 2010
Distinct regulation of tonsillar immune response in virus infection
T Jartti, O Palomares, M Waris, O Tastan, R Nieminen, T Puhakka, ...
Allergy 69 (5), 658-667, 2014
DeepSide: a deep learning approach for drug side effect prediction
OC Uner, HI Kuru, RG Cinbis, O Tastan, AE Cicek
IEEE/ACM Transactions on Computational Biology and Bioinformatics 20 (1 …, 2022
The effect of loops on the structural organization of α-helical membrane proteins
O Tastan, J Klein-Seetharaman, H Meirovitch
Biophysical journal 96 (6), 2299-2312, 2009
DeepKinZero: Zero-Shot Learning for Predicting Kinase-Phosphosite Associations Involving Understudied Kinases
I Deznabi, B Arabaci, M Koyutürk, O Tastan
Bioinformatics, 670638, 2020
PAMOGK: a pathway graph kernel-based multiomics approach for patient clustering
YI Tepeli, AB Ünal, FM Akdemir, O Tastan
Bioinformatics 36 (21), 5237-5246, 2020
Comparison of Stability Predictions and Simulated Unfolding of Rhodopsin Structures
O Tastan, E Yu, M Ganapathiraju, A Aref, AJ Rader, J Klein‐Seetharaman
Photochemistry and photobiology 83 (2), 351-363, 2007
Retinal proteins as model systems for membrane protein folding
O Tastan, A Dutta, P Booth, J Klein-Seetharaman
Biochimica et Biophysica Acta (BBA)-Bioenergetics 1837 (5), 656-663, 2014
Alternative paths in HIV-1 targeted human signal transduction pathways
S Balakrishnan, O Tastan, J Carbonell, J Klein-Seetharaman
BMC genomics 10, 1-13, 2009
Comparison of virus interactions with human signal transduction pathways
I Singh, O Tastan, J Klein-Seetharaman
Proceedings of the First ACM International Conference on Bioinformatics and …, 2010
A utility maximizing and privacy preserving approach for protecting kinship in genomic databases
G Kale, E Ayday, O Tastan
Bioinformatics 34 (2), 181-189, 2018
GLANET: genomic loci annotation and enrichment tool
B Otlu, C Firtina, S Keleş, O Tastan
Bioinformatics 33 (18), 2818-2828, 2017
Revisiting the complex architecture of ALS in Turkey: Expanding genotypes, shared phenotypes, molecular networks, and a public variant database
C Tunca, T Şeker, F Akcimen, C Coşkun, E Bayraktar, R Palvadeau, S Zor, ...
Human mutation 41 (8), e7-e45, 2020
A continuously benchmarked and crowdsourced challenge for rapid development and evaluation of models to predict COVID-19 diagnosis and hospitalization
Y Yan, T Schaffter, T Bergquist, T Yu, J Prosser, Z Aydin, A Jabeer, ...
JAMA Network Open 4 (10), e2124946-e2124946, 2021
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