| RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction JA Cruz, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, S Cao, R Das, ... Rna 18 (4), 610-625, 2012 | 239 | 2012 |
| NPDock: a web server for protein–nucleic acid docking I Tuszynska, M Magnus, K Jonak, W Dawson, JM Bujnicki Nucleic acids research 43 (W1), W425-W430, 2015 | 162 | 2015 |
| Computational methods for prediction of protein–RNA interactions T Puton, L Kozlowski, I Tuszynska, K Rother, JM Bujnicki Journal of structural biology 179 (3), 261-268, 2012 | 108 | 2012 |
| DARS-RNP and QUASI-RNP: new statistical potentials for protein-RNA docking I Tuszynska, JM Bujnicki BMC bioinformatics 12 (1), 1-16, 2011 | 95 | 2011 |
| The structure of M. EcoKI Type I DNA methyltransferase with a DNA mimic antirestriction protein CK Kennaway, A Obarska-Kosinska, JH White, I Tuszynska, LP Cooper, ... Nucleic acids research 37 (3), 762-770, 2009 | 67 | 2009 |
| Predicting atomic details of the unfolding pathway for YibK, a knotted protein from the SPOUT superfamily I Tuszynska, JM Bujnicki Journal of Biomolecular Structure and Dynamics 27 (4), 511-520, 2010 | 38 | 2010 |
| Endothelial cell differentiation is encompassed by changes in long range interactions between inactive chromatin regions H Niskanen, I Tuszynska, R Zaborowski, M Heinäniemi, S Ylä-Herttuala, ... Nucleic acids research 46 (4), 1724-1740, 2018 | 36 | 2018 |
| Crystal structures of the tRNA:m 2 G6 methyltransferase Trm14/TrmN from two domains of life M Fislage, M Roovers, I Tuszynska, JM Bujnicki, L Droogmans, ... Nucleic acids research 40 (11), 5149-5161, 2012 | 34 | 2012 |
| PROTMAP2D: visualization, comparison and analysis of 2D maps of protein structure MJ Pietal, I Tuszynska, JM Bujnicki Bioinformatics 23 (11), 1429-1430, 2007 | 34 | 2007 |
| THUMP from archaeal tRNA:m 22 G10 methyltransferase, a genuine autonomously folding domain G Gabant, S Auxilien, I Tuszynska, M Locard, MJ Gajda, G Chaussinand, ... Nucleic acids research 34 (9), 2483-2494, 2006 | 34 | 2006 |
| Computational modeling of protein–RNA complex structures I Tuszynska, D Matelska, M Magnus, G Chojnowski, JM Kasprzak, ... Methods 65 (3), 310-319, 2014 | 28 | 2014 |
| Sequence-specific cleavage of the RNA strand in DNA–RNA hybrids by the fusion of ribonuclease H with a zinc finger AA Sulej, I Tuszynska, KJ Skowronek, M Nowotny, JM Bujnicki Nucleic acids research 40 (22), 11563-11570, 2012 | 21 | 2012 |
| FILTREST3D: discrimination of structural models using restraints from experimental data MJ Gajda, I Tuszynska, M Kaczor, AY Bakulina, JM Bujnicki Bioinformatics 26 (23), 2986-2987, 2010 | 20 | 2010 |
| Novel inhibitors of the rRNA ErmC'methyltransferase to block resistance to macrolides, lincosamides, streptogramine B antibiotics IP Foik, I Tuszynska, M Feder, E Purta, F Stefaniak, JM Bujnicki European Journal of Medicinal Chemistry 146, 60-67, 2018 | 8 | 2018 |
| Modeling of protein–RNA complex structures using computational docking methods B Madan, JM Kasprzak, I Tuszynska, M Magnus, K Szczepaniak, ... Computational Design of Ligand Binding Proteins, 353-372, 2016 | 6 | 2016 |
| HiCEnterprise: identifying long range chromosomal contacts in Hi-C data H Kranas, I Tuszynska, B Wilczynski PeerJ 9, e10558, 2021 | 1 | 2021 |
| Black chromatin is indispensable for accurate simulations of Drosophila melanogaster chromatin structure. I Tuszynska, P Bednarz, B Wilczynski bioRxiv, 2021 | 1 | 2021 |
| Novel inhibitors of ErmC’methyltransferase responsible for resistance to MLSB antibiotics IP Domagala, I Tuszynska, M Feder, X Lucas, KH Kaminska, E Purta, ... FEBS JOURNAL 281, 43-44, 2014 | | 2014 |
| Engineered'restriction RNases' for sequence-specific cleavage of dsRNA and RNA in DNA-RNA hybrids JM Bujnicki, AA Sulej, D Pianka, I Tuszynska, J Czarnecka, KJ Skowronek, ... FEBS JOURNAL 280, 30-30, 2013 | | 2013 |
| L15. AA Sulej, D G³ów, J Czarnecka, D Pianka, G Chojnowski, I Tuszynska, ... | | |
