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Kathi Zarnack
Kathi Zarnack
Buchmann Institute for Molecular Life Sciences (BMLS)
Verified email at bmls.de
Title
Cited by
Cited by
Year
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution
J König, K Zarnack, G Rot, T Curk, M Kayikci, B Zupan, DJ Turner, ...
Nature structural & molecular biology 17 (7), 909-915, 2010
12142010
Direct Competition between hnRNP C and U2AF65 Protects the Transcriptome from the Exonization of< i> Alu</i> Elements
K Zarnack, J König, M Tajnik, I Martincorena, S Eustermann, I Stévant, ...
Cell 152 (3), 453-466, 2013
4832013
Protein–RNA interactions: new genomic technologies and perspectives
J König, K Zarnack, NM Luscombe, J Ule
Nature Reviews Genetics 13 (2), 77-83, 2012
4632012
SR proteins are NXF1 adaptors that link alternative RNA processing to mRNA export
M Müller-McNicoll, V Botti, AM de Jesus Domingues, H Brandl, ...
Genes & Development 30 (5), 553-566, 2016
2902016
Analysis of alternative splicing associated with aging and neurodegeneration in the human brain
JR Tollervey, Z Wang, T Hortobágyi, JT Witten, K Zarnack, M Kayikci, ...
Genome research 21 (10), 1572-1582, 2011
2622011
iCLIP predicts the dual splicing effects of TIA-RNA interactions
Z Wang, M Kayikci, M Briese, K Zarnack, NM Luscombe, G Rot, B Zupan, ...
PLoS Biol 8 (10), e1000530, 2010
2612010
iCLIP-Transcriptome-wide Mapping of Protein-RNA Interactions with Individual Nucleotide Resolution
J Konig, K Zarnack, G Rot, T Curk, M Kayikci, B Zupan, DJ Turner, ...
Journal of visualized experiments: JoVE, 2011
2412011
The RNA-binding protein HuR is essential for the B cell antibody response
MD Diaz-Muñoz, SE Bell, K Fairfax, E Monzon-Casanova, ...
Nature immunology 16 (4), 415-425, 2015
1572015
The fungal RNA-binding protein Rrm4 mediates long-distance transport of ubi1 and rho3 mRNAs
J König, S Baumann, J Koepke, T Pohlmann, K Zarnack, M Feldbrügge
The EMBO journal 28 (13), 1855-1866, 2009
1142009
Insights into the design and interpretation of iCLIP experiments
N Haberman, I Huppertz, J Attig, J König, Z Wang, C Hauer, MW Hentze, ...
Genome Biology 18 (1), 7, 2017
932017
In vitro iCLIP-based modeling uncovers how the splicing factor U2AF2 relies on regulation by cofactors
FXR Sutandy, S Ebersberger, L Huang, A Busch, M Bach, HS Kang, ...
Genome research 28 (5), 699-713, 2018
712018
Membrane-associated RNA-binding proteins orchestrate organelle-coupled translation
J Béthune, RP Jansen, M Feldbrügge, K Zarnack
Trends in cell biology 29 (2), 178-188, 2019
702019
Tetracycline-regulated gene expression in the pathogen< i> Ustilago maydis</i>
K Zarnack, S Maurer, F Kaffarnik, O Ladendorf, A Brachmann, J Kämper, ...
Fungal Genetics and Biology 43 (11), 727-738, 2006
662006
The RNA-binding protein Rrm4 is essential for efficient secretion of endochitinase Cts1
J Koepke, F Kaffarnik, C Haag, K Zarnack, NM Luscombe, J König, J Ule, ...
Molecular & Cellular Proteomics 10 (12), M111. 011213, 2011
652011
Pheromone‐regulated target genes respond differentially to MAPK phosphorylation of transcription factor Prf1
K Zarnack, H Eichhorn, R Kahmann, M Feldbrügge
Molecular microbiology 69 (4), 1041-1053, 2008
622008
Splicing repression allows the gradual emergence of new Alu-exons in primate evolution
J Attig, IR de los Mozos, N Haberman, Z Wang, W Emmett, K Zarnack, ...
eLife 5, e19545, 2016
602016
Cellular differentiation state modulates the mRNA export activity of SR proteins
V Botti, F McNicoll, MC Steiner, FM Richter, A Solovyeva, M Wegener, ...
Journal of Cell Biology 216 (7), 1993-2009, 2017
592017
mRNA trafficking in fungi
K Zarnack, M Feldbrügge
Molecular Genetics and Genomics 278 (4), 347-359, 2007
592007
Deep and accurate detection of m6A RNA modifications using miCLIP2 and m6Aboost machine learning
N Körtel, C Rücklé, Y Zhou, A Busch, P Hoch-Kraft, FXR Sutandy, J Haase, ...
Nucleic acids research 49 (16), e92-e92, 2021
572021
Control of a neuronal morphology program by an RNA-binding zinc finger protein, Unkempt
J Murn, K Zarnack, YJ Yang, O Durak, EA Murphy, S Cheloufi, ...
Genes & Development 29 (5), 501-512, 2015
532015
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