Hui Liu (刘辉)
Hui Liu (刘辉)
School of Computer Science and Technology, Nanjing Tech University, Nanjing, China
Zweryfikowany adres z njtech.edu.cn
Cytowane przez
Cytowane przez
End-point binding free energy calculation with MM/PBSA and MM/GBSA: strategies and applications in drug design
E Wang, H Sun, J Wang, Z Wang, H Liu, JZH Zhang, T Hou
Chemical reviews 119 (16), 9478-9508, 2019
Assessing the performance of the MM/PBSA and MM/GBSA methods. 6. Capability to predict protein–protein binding free energies and re-rank binding poses generated by protein …
F Chen, H Liu, H Sun, P Pan, Y Li, D Li, T Hou
Physical Chemistry Chemical Physics 18 (32), 22129-22139, 2016
HawkDock: a web server to predict and analyze the protein–protein complex based on computational docking and MM/GBSA
G Weng, E Wang, Z Wang, H Liu, F Zhu, D Li, T Hou
Nucleic acids research 47 (W1), W322-W330, 2019
Cassava genome from a wild ancestor to cultivated varieties
W Wang, B Feng, J Xiao, Z Xia, X Zhou, P Li, W Zhang, Y Wang, BL Møller, ...
Nature communications 5 (1), 5110, 2014
Assessing the performance of MM/PBSA and MM/GBSA methods. 7. Entropy effects on the performance of end-point binding free energy calculation approaches
H Sun, L Duan, F Chen, H Liu, Z Wang, P Pan, F Zhu, JZH Zhang, T Hou
Physical Chemistry Chemical Physics 20 (21), 14450-14460, 2018
Improving compound–protein interaction prediction by building up highly credible negative samples
H Liu, J Sun, J Guan, J Zheng, S Zhou
Bioinformatics 31 (12), i221-i229, 2015
SynLethDB: synthetic lethality database toward discovery of selective and sensitive anticancer drug targets
J Guo, H Liu, J Zheng
Nucleic acids research 44 (D1), D1011-D1017, 2016
DrugCombDB: a comprehensive database of drug combinations toward the discovery of combinatorial therapy
H Liu, W Zhang, B Zou, J Wang, Y Deng, L Deng
Nucleic acids research 48 (D1), D871-D881, 2020
CaFE: a tool for binding affinity prediction using end-point free energy methods
H Liu, T Hou
Bioinformatics 32 (14), 2216-2218, 2016
ADMET evaluation in drug discovery. 16. Predicting hERG blockers by combining multiple pharmacophores and machine learning approaches
S Wang, H Sun, H Liu, D Li, Y Li, T Hou
Molecular pharmaceutics 13 (8), 2855-2866, 2016
Assessing the performance of MM/PBSA and MM/GBSA methods. 8. Predicting binding free energies and poses of protein–RNA complexes
F Chen, H Sun, J Wang, F Zhu, H Liu, Z Wang, T Lei, Y Li, T Hou
Rna 24 (9), 1183-1194, 2018
A new hybrid method for learning bayesian networks: Separation and reunion
H Liu, S Zhou, W Lam, J Guan
Knowledge-Based Systems 121, 185-197, 2017
ADMET evaluation in drug discovery. 18. Reliable prediction of chemical-induced urinary tract toxicity by boosting machine learning approaches
T Lei, H Sun, Y Kang, F Zhu, H Liu, W Zhou, Z Wang, D Li, Y Li, T Hou
Molecular pharmaceutics 14 (11), 3935-3953, 2017
Inferring new indications for approved drugs via random walk on drug-disease heterogenous networks
H Liu, Y Song, J Guan, L Luo, Z Zhuang
BMC bioinformatics 17, 269-277, 2016
DeepDDS: deep graph neural network with attention mechanism to predict synergistic drug combinations
J Wang, X Liu, S Shen, L Deng, H Liu
Briefings in Bioinformatics 23 (1), bbab390, 2022
ADMET evaluation in drug discovery. Part 17: development of quantitative and qualitative prediction models for chemical-induced respiratory toxicity
T Lei, F Chen, H Liu, H Sun, Y Kang, D Li, Y Li, T Hou
Molecular pharmaceutics 14 (7), 2407-2421, 2017
Anti-aging effect of polysaccharide from Bletilla striata on nematode Caenorhabditis elegans
Y Zhang, T Lv, M Li, T Xue, H Liu, W Zhang, X Ding, Z Zhuang
Pharmacognosy magazine 11 (43), 449, 2015
HawkRank: a new scoring function for protein–protein docking based on weighted energy terms
T Feng, F Chen, Y Kang, H Sun, H Liu, D Li, F Zhu, T Hou
Journal of cheminformatics 9, 1-15, 2017
Beneficial effects of wheat gluten hydrolysate to extend lifespan and induce stress resistance in nematode Caenorhabditis elegans
W Zhang, T Lv, M Li, Q Wu, L Yang, H Liu, D Sun, L Sun, Z Zhuang, ...
PLoS One 8 (9), e74553, 2013
Function of RSKS-1-AAK-2-DAF-16 signaling cascade in enhancing toxicity of multi-walled carbon nanotubes can be suppressed by mir-259 activation in Caenorhabditis elegans
Z Zhuang, M Li, H Liu, L Luo, W Gu, Q Wu, D Wang
Scientific reports 6 (1), 32409, 2016
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