Karolina L. Tkaczuk
Karolina L. Tkaczuk
Verified email at virginia.edu
Title
Cited by
Cited by
Year
Structural and evolutionary bioinformatics of the SPOUT superfamily of methyltransferases
KL Tkaczuk, S Dunin-Horkawicz, E Purta, JM Bujnicki
BMC bioinformatics 8 (1), 73, 2007
1492007
FRankenstein becomes a cyborg: the automatic recombination and realignment of fold recognition models in CASP6
J Kosinski, MJ Gajda, IA Cymerman, MA Kurowski, M Pawlowski, ...
PROTEINS: Structure, Function, and Bioinformatics 61 (S7), 106-113, 2005
792005
Molecular phylogenetics and comparative modeling of HEN1, a methyltransferase involved in plant microRNA biogenesis
KL Tkaczuk, A Obarska, JM Bujnicki
BMC evolutionary biology 6 (1), 1-16, 2006
602006
Structural and functional insight into the universal stress protein family
KL Tkaczuk, I A. Shumilin, M Chruszcz, E Evdokimova, A Savchenko, ...
Evolutionary applications 6 (3), 434-449, 2013
59*2013
The yfhQ gene of Escherichia coli encodes a tRNA: Cm32/Um32 methyltransferase
E Purta, F Van Vliet, KL Tkaczuk, S Dunin-Horkawicz, H Mori, ...
BMC molecular biology 7 (1), 1-13, 2006
522006
A cold-adapted esterase from psychrotrophic Pseudoalteromas sp. strain 643A
H Cieśliński, AM Białkowska, A Długołęcka, M Daroch, KL Tkaczuk, ...
Archives of microbiology 188 (1), 27-36, 2007
432007
Functional specialization of domains tandemly duplicated within 16S rRNA methyltransferase RsmC
S Sunita, E Purta, M Durawa, KL Tkaczuk, J Swaathi, JM Bujnicki, ...
Nucleic acids research 35 (13), 4264-4274, 2007
402007
New archaeal methyltransferases forming 1-methyladenosine or 1-methyladenosine and 1-methylguanosine at position 9 of tRNA
M Kempenaers, M Roovers, Y Oudjama, KL Tkaczuk, JM Bujnicki, ...
Nucleic acids research 38 (19), 6533-6543, 2010
382010
Crystal structure of the Escherichia coli 23S rRNA: m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes
S Sunita, KL Tkaczuk, E Purta, JM Kasprzak, S Douthwaite, JM Bujnicki, ...
Journal of molecular biology 383 (3), 652-666, 2008
352008
Identification and molecular modeling of a novel lipase from an Antarctic soil metagenomic library
J KUR, M TURKIEWICZ
POLSKIE TOWARZYSTWO MIKROBIOLOGÓW POLISH SOCIETY OF MICROBIOLOGISTS 58 (3 …, 2009
342009
Structural basis for the methylation of G1405 in 16S rRNA by aminoglycoside resistance methyltransferase Sgm from an antibiotic producer: a diversity of active sites in m 7 G …
N Husain, KL Tkaczuk, SR Tulsidas, KH Kaminska, S Čubrilo, ...
Nucleic acids research 38 (12), 4120-4132, 2010
312010
Biosynthesis, purification and characterization of β-fructofuranosidase from Bifidobacterium longum KN29. 1
M Jedrzejczak-Krzepkowska, KL Tkaczuk, S Bielecki
Process Biochemistry 46 (10), 1963-1972, 2011
242011
Modeling and experimental analyses reveal a two-domain structure and amino acids important for the activity of aminoglycoside resistance methyltransferase Sgm
GM Vlahoviček, S Čubrilo, KL Tkaczuk, JM Bujnicki
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1784 (4), 582-590, 2008
242008
The YqfN protein of Bacillus subtilis is the tRNA: m 1 A22 methyltransferase (TrmK)
M Roovers, KH Kaminska, KL Tkaczuk, D Gigot, L Droogmans, ...
Nucleic acids research 36 (10), 3252-3262, 2008
222008
Crystal structure of a putative isochorismatase hydrolase from Oleispira antarctica
AM Goral, KL Tkaczuk, M Chruszcz, O Kagan, A Savchenko, W Minor
Journal of structural and functional genomics 13 (1), 27-36, 2012
182012
The crystal structure of Escherichia coli spermidine synthase SpeE reveals a unique substrate-binding pocket
X Zhou, TK Chua, KL Tkaczuk, JM Bujnicki, J Sivaraman
Journal of structural biology 169 (3), 277-285, 2010
182010
Assessing the accuracy of template-based structure prediction metaservers by comparison with structural genomics structures
D Gront, M Grabowski, MD Zimmerman, J Raynor, KL Tkaczuk, W Minor
Journal of structural and functional genomics 13 (4), 213-225, 2012
122012
Self-Organization of Viewpoint Dependent Face Representation by the Self-Supervised Learning and Viewpoint Independent Face Recognition by the Mixture of Classifiers.
T Kurita, H Shimai, T Mishima, T Takahashi
MVA, 319-322, 2000
112000
Trm13p, the tRNA: Xm4 modification enzyme from Saccharomyces cerevisiae is a member of the Rossmann-fold MTase superfamily: prediction of structure and active site
KL Tkaczuk
Journal of molecular modeling 16 (3), 599-606, 2010
82010
Identification of the csp gene and molecular modelling of the CspA-like protein from Antarctic soil-dwelling psychrotrophic bacterium Psychrobacter sp. B6.
A Kaufman-Szymczyk, A Wojtasik, P Parniewski, A Białkowska, K Tkaczuk, ...
Acta Biochimica Polonica 56 (1), 2009
82009
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Articles 1–20