Pavel Pevzner

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Alexey GurevichJun. Prof. of Bioinformatics, HIPS & Saarland UniversityVerified email at helmholtz-hips.de
Dmitry AntipovVisiting fellow, National Institutes of HealthVerified email at spbu.ru
Max A. AlekseyevGeorge Washington UniversityVerified email at gwu.edu
Anton BankevichPSUVerified email at psu.edu
Vineet BafnaProfessor, Computer Science & Engineering, University of California, San DiegoVerified email at cs.ucsd.edu
Sergey NurkSenior Applications Bioinformatician, Oxford Nanopore TechnologiesVerified email at nanoporetech.com
Anton KorobeynikovSaint Petersburg State UniversityVerified email at korobeynikov.info
Andrey PrjibelskiPostdoctoral Researcher @ University of HelsinkiVerified email at helsinki.fi
Son PhamBioTuringVerified email at bioturing.com
Pieter C DorresteinUCSDVerified email at ucsd.edu
Haixu TangProfessor, Indiana UniversityVerified email at indiana.edu
Mikhail KolmogorovStadtman Investigator, National Cancer Institute, NIHVerified email at nih.gov
Alla LapidusSt. Petersburg State University; Санкт Петербургский государственный университетVerified email at spbu.ru
Hosein MohimaniAssistant Professor, Computational Biology Department, School of Computer Science, Carnegie MellonVerified email at andrew.cmu.edu
Alexander S. KulikovSteklov Institute of Mathematics at St. PetersburgVerified email at logic.pdmi.ras.ru
Nitin GuptaAssociate Professor, Biological Sciences and Bioengineering, Indian Institute of Technology KanpurVerified email at iitk.ac.in
Sangtae KimBertis Bioscience IncVerified email at bertis.com
Richard D SmithChief Scientist and Battelle Fellow, Biological Sciences Division, PNNLVerified email at pnnl.gov
Sridhar HannenhalliSenior Investigator, Cancer Data Science Lab, National Cancer Institute. NIHVerified email at nih.gov
Guillaume BourqueProfessor, Human Genetics, McGill UniversityVerified email at mcgill.ca

Pavel Pevzner

Professor of Computer Science, University of California at San Diego

Verified email at eng.ucsd.edu - Homepage

Bioinformatics Algorithms Computational Biology


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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing A Bankevich, S Nurk, D Antipov, AA Gurevich, M Dvorkin, AS Kulikov, ... Journal of computational biology 19 (5), 455-477, 2012	20394	2012
Initial sequencing and comparative analysis of the mouse genome European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ... Nature 420 (6915), 520-562, 2002	8394	2002
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking M Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ... Nature biotechnology 34 (8), 828-837, 2016	2940	2016
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution Project management: Fulton Lucinda A. 1 Mardis Elaine R. 1 Wilson Richard K. 1 Nature 432 (7018), 695-716, 2004	2856	2004
metaSPAdes: a new versatile metagenomic assembler S Nurk, D Meleshko, A Korobeynikov, PA Pevzner Genome research 27 (5), 824-834, 2017	2650	2017
Assembly of long, error-prone reads using repeat graphs M Kolmogorov, J Yuan, Y Lin, PA Pevzner Nature biotechnology 37 (5), 540-546, 2019	2463	2019
Genome sequence of the Brown Norway rat yields insights into mammalian evolution University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ... Nature 428 (6982), 493-521, 2004	2457	2004
An Eulerian path approach to DNA fragment assembly PA Pevzner, H Tang, MS Waterman Proceedings of the national academy of sciences 98 (17), 9748-9753, 2001	1813	2001
De novo identification of repeat families in large genomes AL Price, NC Jones, PA Pevzner Bioinformatics 21 (suppl_1), i351-i358, 2005	1724	2005
The complete sequence of a human genome S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ... Science 376 (6588), 44-53, 2022	1396	2022
Transforming cabbage into turnip: polynomial algorithm for sorting signed permutations by reversals S Hannenhalli, PA Pevzner Journal of the ACM (JACM) 46 (1), 1-27, 1999	1199	1999
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products S Nurk, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, ... Journal of Computational Biology 20 (10), 714-737, 2013	1122	2013
MS-GF+ makes progress towards a universal database search tool for proteomics S Kim, PA Pevzner Nature communications 5 (1), 5277, 2014	1046	2014
Computational molecular biology: an algorithmic approach P Pevzner MIT press, 2000	1010	2000
How to apply de Bruijn graphs to genome assembly PEC Compeau, PA Pevzner, G Tesler Nature biotechnology 29 (11), 987-991, 2011	855	2011
PepNovo: de novo peptide sequencing via probabilistic network modeling A Frank, P Pevzner Analytical chemistry 77 (4), 964-973, 2005	831	2005
De Novo Peptide Sequencing via Tandem Mass Spectrometry V Dančík, TA Addona, KR Clauser, JE Vath, PA Pevzner Journal of computational biology 6 (3-4), 327-342, 1999	808	1999
An introduction to bioinformatics algorithms NC Jones, PA Pevzner MIT press, 2004	804	2004
Combinatorial approaches to finding subtle signals in DNA sequences. PA Pevzner, SH Sze ISMB 8, 269-278, 2000	797	2000
Assembling genomes and mini-metagenomes from highly chimeric reads S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ... Research in Computational Molecular Biology: 17th Annual International …, 2013	769	2013

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