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Anna Paola Muntoni
Tytuł
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An analytic approximation of the feasible space of metabolic networks
A Braunstein, AP Muntoni, A Pagnani
Nature communications 8 (1), 14915, 2017
412017
Network reconstruction from infection cascades
A Braunstein, A Ingrosso, AP Muntoni
Journal of the Royal Society Interface 16 (151), 20180844, 2019
392019
Epidemic mitigation by statistical inference from contact tracing data
A Baker, I Biazzo, A Braunstein, G Catania, L Dall’Asta, A Ingrosso, ...
Proceedings of the National Academy of Sciences 118 (32), e2106548118, 2021
292021
Sparse generative modeling via parameter reduction of Boltzmann machines: Application to protein-sequence families
P Barrat-Charlaix, AP Muntoni, K Shimagaki, M Weigt, F Zamponi
Physical Review E 104 (2), 024407, 2021
26*2021
Aligning biological sequences by exploiting residue conservation and coevolution
AP Muntoni, A Pagnani, M Weigt, F Zamponi
Physical Review E 102 (6), 062409, 2020
192020
adabmDCA: adaptive Boltzmann machine learning for biological sequences
AP Muntoni, A Pagnani, M Weigt, F Zamponi
BMC bioinformatics 22, 1-19, 2021
162021
Compressed sensing reconstruction using Expectation Propagation
A Braunstein, AP Muntoni, A Pagnani, M Pieropan
Journal of Physics A: Mathematical and Theoretical 53 (18), 184001, 2020
142020
Relationship between fitness and heterogeneity in exponentially growing microbial populations
AP Muntoni, A Braunstein, A Pagnani, D De Martino, A De Martino
Biophysical Journal 121 (10), 1919-1930, 2022
122022
Unbiased metabolic flux inference through combined thermodynamic and 13C flux analysis
J Saldida, AP Muntoni, D de Martino, G Hubmann, B Niebel, AM Schmidt, ...
bioRxiv, 2020.06. 29.177063, 2020
102020
Nonconvex image reconstruction via expectation propagation
AP Muntoni, RDH Rojas, A Braunstein, A Pagnani, IP Castillo
Physical Review E 100 (3), 032134, 2019
52019
Practical optimization of Steiner trees via the cavity method
A Braunstein, A Muntoni
Journal of Statistical Mechanics: Theory and Experiment 2016 (7), 073302, 2016
42016
Optimal metabolic strategies for microbial growth in stationary random environments
AP Muntoni, A De Martino
Physical Biology 20 (3), 036001, 2023
32023
The cavity approach for Steiner trees packing problems
A Braunstein, AP Muntoni
Journal of Statistical Mechanics: Theory and Experiment 2018 (12), 123401, 2018
32018
Inference in conditioned dynamics through causality restoration
A Braunstein, G Catania, L Dall’Asta, M Mariani, AP Muntoni
Scientific Reports 13 (1), 7350, 2023
22023
Statistical Mechanics approaches to optimization and inference
AP Muntoni
22019
A density consistency approach to the inverse Ising problem
A Braunstein, G Catania, L Dall’Asta, AP Muntoni
Journal of Statistical Mechanics: Theory and Experiment 2021 (3), 033416, 2021
12021
Effectiveness of probabilistic contact tracing in epidemic containment: the role of super-spreaders and transmission paths reconstruction
AP Muntoni, F Mazza, A Braunstein, G Catania, L Dall'Asta
arXiv preprint arXiv:2312.00910, 2023
2023
DCAlign v1. 0: Aligning biological sequences using co-evolution models and informed priors
AP Muntoni, A Pagnani
Bioinformatics 39 (9), btad537, 2023
2023
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