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Joanna Zyla
Joanna Zyla
PhD, Departament of Data Science and Engineering at Silesian University of Technology
Zweryfikowany adres z polsl.pl
Tytuł
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Cytowane przez
Rok
Metabolite changes in blood predict the onset of tuberculosis
J Weiner 3rd, J Maertzdorf, JS Sutherland, FJ Duffy, E Thompson, ...
Nature communications 9 (1), 5208, 2018
1352018
Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms
J Zyla, M Marczyk, T Domaszewska, SHE Kaufmann, J Polanska, ...
Bioinformatics 35 (24), 5146-5154, 2019
1102019
Increased risk of severe clinical course of COVID-19 in carriers of HLA-C* 04: 01
J Weiner, P Suwalski, M Holtgrewe, A Rakitko, C Thibeault, M Mueller, ...
EClinicalMedicine 40, 2021
712021
Ranking metrics in gene set enrichment analysis: do they matter?
J Zyla, M Marczyk, J Weiner, J Polanska
BMC bioinformatics 18, 1-12, 2017
612017
Cellular stress promotes NOD1/2‐dependent inflammation via the endogenous metabolite sphingosine‐1‐phosphate
G Pei, J Zyla, L He, P Moura‐Alves, H Steinle, P Saikali, L Lozza, ...
The EMBO journal 40 (13), e106272, 2021
472021
Innate-like Gene Expression of Lung-Resident Memory CD8+ T Cells during Experimental Human Influenza: A Clinical Study
S Paterson, S Kar, SK Ung, Z Gardener, E Bergstrom, S Ascough, ...
American journal of respiratory and critical care medicine 204 (7), 826-841, 2021
162021
The lipid composition of serum-derived small extracellular vesicles in participants of a lung cancer screening study
M Smolarz, A Kurczyk, K Jelonek, J Żyła, Ł Mielańczyk, M Sitkiewicz, ...
Cancers 13 (14), 3414, 2021
162021
Kras mutations and PU.1 promoter methylation are new pathways in murine radiation-induced AML
G O’Brien, L Cruz-Garcia, J Zyla, N Brown, R Finnon, J Polanska, C Badie
Carcinogenesis 41 (8), 1104-1112, 2020
162020
Serum metabolite profiles in participants of lung cancer screening study; comparison of two independent cohorts
P Widłak, K Jelonek, A Kurczyk, J Żyła, M Sitkiewicz, E Bottoni, ...
Cancers 13 (11), 2714, 2021
142021
Screening support system based on patient survey data—Case study on classification of initial, locally collected COVID-19 data
J Henzel, J Tobiasz, M Kozielski, M Bach, P Foszner, A Gruca, M Kania, ...
Applied Sciences 11 (22), 10790, 2021
12*2021
Combining CDKN1A gene expression and genome-wide SNPs in a twin cohort to gain insight into the heritability of individual radiosensitivity
J Zyla, S Kabacik, G O’Brien, S Wakil, N Al-Harbi, J Kaprio, C Badie, ...
Functional & integrative genomics 19, 575-585, 2019
122019
Platelets restrict the oxidative burst in phagocytes and facilitate primary progressive tuberculosis
L Scheuermann, G Pei, T Domaszewska, J Zyla, D Oberbeck-Müller, ...
American Journal of Respiratory and Critical Care Medicine 202 (5), 730-744, 2020
112020
Weaker protection against tuberculosis in BCG-vaccinated male 129 S2 mice compared to females
NE Nieuwenhuizen, J Zyla, U Zedler, S Bandermann, UA Abed, ...
Vaccine 39 (50), 7253-7264, 2021
92021
Symptom-based early-stage differentiation between SARS-CoV-2 versus other respiratory tract infections—Upper Silesia pilot study
J Mika, J Tobiasz, J Zyla, A Papiez, M Bach, A Werner, M Kozielski, ...
Scientific reports 11 (1), 13580, 2021
72021
Sensitivity, specificity and prioritization of gene set analysis when applying different ranking metrics
J Zyla, M Marczyk, J Polanska
10th International Conference on Practical Applications of Computational …, 2016
72016
Seeking genetic signature of radiosensitivity-a novel method for data analysis in case of small sample sizes
J Zyla, P Finnon, R Bulman, S Bouffler, C Badie, J Polanska
Theoretical Biology and Medical Modelling 11, 1-16, 2014
62014
Importance of SNP dependency correction and association integration for gene set analysis in genome-wide association studies
M Marczyk, A Macioszek, J Tobiasz, J Polanska, J Zyla
Frontiers in Genetics 12, 767358, 2021
52021
Gene set enrichment analysis reveals individual variability in host responses in tuberculosis patients
T Domaszewska, J Zyla, R Otto, SHE Kaufmann, J Weiner
Frontiers in Immunology 12, 694680, 2021
52021
Reproducibility of finding enriched gene sets in biological data analysis
J Zyla, M Marczyk, J Polanska
11th International Conference on Practical Applications of Computational …, 2017
42017
Modelling of Genetic Interactions in GWAS Reveals More Complex Relations between Genotype and Phenotype.
J Zyla, C Badie, G Alsbeih, J Polanska
BIOINFORMATICS, 204-208, 2014
42014
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